Homologs in group_5

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21 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05895 FBDBKF_05895 57.3 Morganella morganii S1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
FBDBKF_09265 FBDBKF_09265 42.9 Morganella morganii S1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
EHELCC_07680 EHELCC_07680 100.0 Morganella morganii S2 nlpA lipoprotein NlpA
EHELCC_08940 EHELCC_08940 57.3 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
EHELCC_10145 EHELCC_10145 42.9 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_08005 NLDBIP_08005 100.0 Morganella morganii S4 nlpA lipoprotein NlpA
NLDBIP_09320 NLDBIP_09320 57.3 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_10490 NLDBIP_10490 42.9 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_06260 LHKJJB_06260 100.0 Morganella morganii S3 nlpA lipoprotein NlpA
LHKJJB_08435 LHKJJB_08435 57.3 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_10865 LHKJJB_10865 42.9 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_07985 HKOGLL_07985 57.3 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_13925 HKOGLL_13925 42.9 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_19115 HKOGLL_19115 100.0 Morganella morganii S5 nlpA lipoprotein NlpA
F4V73_RS02430 F4V73_RS02430 91.5 Morganella psychrotolerans nlpA lipoprotein NlpA
F4V73_RS10700 F4V73_RS10700 43.6 Morganella psychrotolerans - MetQ/NlpA family lipoprotein
F4V73_RS16000 F4V73_RS16000 57.7 Morganella psychrotolerans - MetQ/NlpA family lipoprotein
PMI_RS06020 PMI_RS06020 37.0 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS06360 PMI_RS06360 78.3 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS11165 PMI_RS11165 55.8 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS14940 PMI_RS14940 39.8 Proteus mirabilis HI4320 - MetQ/NlpA family ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_5

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_5

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P04846 2.59e-149 421 80 0 249 1 nlpA Lipoprotein 28 Escherichia coli (strain K12)
Q8XC50 3.92e-148 418 79 0 249 3 nlpA Lipoprotein 28 Escherichia coli O157:H7
Q8ZRN1 2.14e-117 340 60 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P28635 2.67e-117 340 60 0 271 1 metQ D-methionine-binding lipoprotein MetQ Escherichia coli (strain K12)
Q8Z992 1.5e-116 338 60 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhi
Q8X8V9 6.94e-116 336 60 0 271 3 metQ D-methionine-binding lipoprotein MetQ Escherichia coli O157:H7
Q8ZH40 7.75e-111 323 61 0 252 3 metQ D-methionine-binding lipoprotein MetQ Yersinia pestis
Q08870 6.21e-92 275 52 2 263 3 plpC Outer membrane lipoprotein 3 Mannheimia haemolytica
P31728 8.46e-92 275 52 4 270 1 metQ Probable D-methionine-binding lipoprotein MetQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CK95 1.01e-91 275 50 3 277 3 metQ Probable D-methionine-binding lipoprotein MetQ Pasteurella multocida (strain Pm70)
Q08868 3.62e-87 263 54 2 241 3 plpA Outer membrane lipoprotein 1 Mannheimia haemolytica
Q9KTJ7 5.73e-84 255 54 1 271 3 metQ Probable D-methionine-binding lipoprotein MetQ Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q08869 4.31e-73 228 47 3 271 3 plpB Outer membrane lipoprotein 2 Mannheimia haemolytica
O07950 4.15e-38 137 31 4 266 1 tpn32 Membrane lipoprotein TpN32 Treponema pallidum (strain Nichols)
O32167 3.09e-21 93 27 7 276 1 metQ Methionine-binding lipoprotein MetQ Bacillus subtilis (strain 168)
P54594 1.03e-20 92 27 9 281 3 yhcJ Uncharacterized lipoprotein YhcJ Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_19935
Feature type CDS
Gene nlpA
Product lipoprotein NlpA
Location 7054 - 7869 (strand: 1)
Length 816 (nucleotides) / 271 (amino acids)

Contig

Accession contig_45
Length 15421 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_5
Orthogroup size 22
N. genomes 7

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Genomic region

Domains

PF03180 NlpA lipoprotein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1464 Inorganic ion transport and metabolism (P) P ABC-type metal ion transport system, periplasmic component/surface antigen

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02073 D-methionine transport system substrate-binding protein ABC transporters -

Protein Sequence

MKKQFSLFFSGAVLALGFLLSGCDKGTTDMTKIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDPTANGDLDANVFQHRPFLAQDNNARGYNLVAVANTFVFPMAGYSDKIKNISELKTGDTIAMPNDPTNLGRALLLMEKEKLIKLKSGTGLLPTALDITENPLKLNIMELEGAQLPRVIKDPKVTVAIISTTYIQQTGLSPVKDSVFIEDKESPYVNIIVTREDNKDAENVQKFIKAYQSPEVAKAAETLFNGGAVPGW

Flanking regions ( +/- flanking 50bp)

TTACCGCTATTTACTGATACATACTTTCAGTAAACAGAATGGTGAACATAATGAAAAAGCAATTTTCTCTGTTTTTTTCCGGTGCTGTTTTAGCACTGGGATTTTTACTGTCAGGCTGTGATAAGGGCACAACTGACATGACAAAAATTAAAGTCGGTGTGATTAATGGCGCCGAGCAGGATGTGGCTGAGGTTGCCAAAAAAGTGGCCAAAGAAAAATACGGACTGGATGTCGAACTGGTCGGTTTCAGCGGTTCATTGTTACCGAATGATCCGACGGCCAATGGGGATCTTGATGCCAACGTCTTCCAGCATCGCCCGTTCCTGGCCCAGGATAATAACGCCAGAGGTTATAACCTGGTCGCTGTGGCAAATACCTTTGTCTTTCCGATGGCAGGTTATTCCGATAAAATTAAAAATATCAGTGAATTAAAAACCGGTGATACCATTGCCATGCCGAATGACCCGACAAACCTCGGCCGTGCATTATTATTAATGGAAAAAGAGAAGCTGATTAAATTAAAATCCGGCACCGGTTTATTACCGACCGCGCTGGATATTACTGAAAATCCGCTGAAACTGAATATCATGGAGCTGGAAGGCGCTCAGTTACCCCGGGTGATTAAAGATCCGAAAGTCACAGTAGCCATTATCAGTACCACCTATATTCAGCAAACCGGCTTATCCCCGGTAAAAGACAGTGTGTTTATCGAAGATAAAGAATCACCGTACGTCAATATTATTGTGACCCGTGAAGATAATAAAGACGCGGAGAATGTACAAAAATTTATTAAAGCTTATCAGTCACCGGAAGTTGCCAAAGCCGCAGAAACGCTGTTTAACGGCGGCGCCGTTCCCGGCTGGTAATCACGACAATACAGTGCCGGATACTCTCCGGCACTGTCATTCACGCCTCA