COG1464


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1464, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 27 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type metal ion transport system, periplasmic component/surface antigen
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG1464 is associated with 27 different proteins (see tab "Protein list" and "Profile")
The 27 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_39 FBDBKF_00755 137926 138249 1 Lipoprotein Morganella morganii S1
1 group_5 FBDBKF_05895 2766 3581 1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S1
2 group_5 FBDBKF_09265 84704 85507 -1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S1
3 group_5 FBDBKF_19935 7054 7869 1 nlpA lipoprotein NlpA Morganella morganii S1
4 group_39 EHELCC_00790 170619 170942 -1 Lipoprotein Morganella morganii S2
5 group_5 EHELCC_07680 7553 8368 -1 nlpA lipoprotein NlpA Morganella morganii S2
6 group_5 EHELCC_08940 3338 4153 1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S2
7 group_5 EHELCC_10145 60597 61400 1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S2
8 group_39 NLDBIP_02670 509194 509517 1 Lipoprotein Morganella morganii S4
9 group_5 NLDBIP_08005 7553 8368 -1 nlpA lipoprotein NlpA Morganella morganii S4
10 group_5 NLDBIP_09320 3338 4153 1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S4
11 group_5 NLDBIP_10490 38868 39671 1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S4
12 group_39 LHKJJB_04185 116435 116758 1 Lipoprotein Morganella morganii S3
13 group_5 LHKJJB_06260 248791 249606 1 nlpA lipoprotein NlpA Morganella morganii S3
14 group_5 LHKJJB_08435 213085 213900 -1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S3
15 group_5 LHKJJB_10865 151857 152660 -1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S3
16 group_39 HKOGLL_02860 170824 171147 -1 Lipoprotein Morganella morganii S5
17 group_5 HKOGLL_07985 213085 213900 -1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S5
18 group_5 HKOGLL_13925 85158 85961 -1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen Morganella morganii S5
19 group_5 HKOGLL_19115 7060 7875 1 nlpA lipoprotein NlpA Morganella morganii S5
20 group_5 F4V73_RS02430 513899 514714 -1 nlpA lipoprotein NlpA Morganella psychrotolerans
21 group_5 F4V73_RS10700 269956 270759 1 MetQ/NlpA family lipoprotein Morganella psychrotolerans
22 group_5 F4V73_RS16000 209874 210689 -1 MetQ/NlpA family lipoprotein Morganella psychrotolerans
23 group_5 PMI_RS06020 1319484 1320284 1 MetQ/NlpA family lipoprotein Proteus mirabilis HI4320
24 group_5 PMI_RS06360 1392662 1393477 1 MetQ/NlpA family lipoprotein Proteus mirabilis HI4320
25 group_5 PMI_RS11165 2456987 2457802 1 MetQ/NlpA family lipoprotein Proteus mirabilis HI4320
26 group_5 PMI_RS14940 3315888 3316691 -1 MetQ/NlpA family ABC transporter substrate-binding protein Proteus mirabilis HI4320