Homologs in group_5

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21 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05895 FBDBKF_05895 55.0 Morganella morganii S1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
FBDBKF_09265 FBDBKF_09265 41.2 Morganella morganii S1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
FBDBKF_19935 FBDBKF_19935 78.3 Morganella morganii S1 nlpA lipoprotein NlpA
EHELCC_07680 EHELCC_07680 78.3 Morganella morganii S2 nlpA lipoprotein NlpA
EHELCC_08940 EHELCC_08940 55.0 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
EHELCC_10145 EHELCC_10145 41.2 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_08005 NLDBIP_08005 78.3 Morganella morganii S4 nlpA lipoprotein NlpA
NLDBIP_09320 NLDBIP_09320 55.0 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_10490 NLDBIP_10490 41.2 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_06260 LHKJJB_06260 78.3 Morganella morganii S3 nlpA lipoprotein NlpA
LHKJJB_08435 LHKJJB_08435 55.0 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_10865 LHKJJB_10865 41.2 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_07985 HKOGLL_07985 55.0 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_13925 HKOGLL_13925 41.2 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_19115 HKOGLL_19115 78.3 Morganella morganii S5 nlpA lipoprotein NlpA
F4V73_RS02430 F4V73_RS02430 77.9 Morganella psychrotolerans nlpA lipoprotein NlpA
F4V73_RS10700 F4V73_RS10700 41.9 Morganella psychrotolerans - MetQ/NlpA family lipoprotein
F4V73_RS16000 F4V73_RS16000 56.1 Morganella psychrotolerans - MetQ/NlpA family lipoprotein
PMI_RS06020 PMI_RS06020 36.5 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS11165 PMI_RS11165 52.8 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein
PMI_RS14940 PMI_RS14940 37.8 Proteus mirabilis HI4320 - MetQ/NlpA family ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_5

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_5

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P04846 3.36e-138 393 76 0 249 1 nlpA Lipoprotein 28 Escherichia coli (strain K12)
Q8XC50 4.93e-138 392 76 0 249 3 nlpA Lipoprotein 28 Escherichia coli O157:H7
Q8ZRN1 2.38e-111 325 57 1 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P28635 4.2e-111 324 57 1 271 1 metQ D-methionine-binding lipoprotein MetQ Escherichia coli (strain K12)
Q8Z992 1.86e-110 322 57 1 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhi
Q8X8V9 3.58e-110 322 57 1 271 3 metQ D-methionine-binding lipoprotein MetQ Escherichia coli O157:H7
Q8ZH40 6.79e-108 316 56 0 271 3 metQ D-methionine-binding lipoprotein MetQ Yersinia pestis
Q08870 6.83e-89 267 51 2 264 3 plpC Outer membrane lipoprotein 3 Mannheimia haemolytica
P31728 8.82e-86 260 48 4 271 1 metQ Probable D-methionine-binding lipoprotein MetQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CK95 1.77e-85 259 48 2 267 3 metQ Probable D-methionine-binding lipoprotein MetQ Pasteurella multocida (strain Pm70)
Q08868 1.57e-81 249 45 3 275 3 plpA Outer membrane lipoprotein 1 Mannheimia haemolytica
Q9KTJ7 3.54e-81 248 53 4 273 3 metQ Probable D-methionine-binding lipoprotein MetQ Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q08869 4.35e-69 218 43 2 274 3 plpB Outer membrane lipoprotein 2 Mannheimia haemolytica
O07950 5.42e-35 129 31 2 236 1 tpn32 Membrane lipoprotein TpN32 Treponema pallidum (strain Nichols)
O32167 1.16e-24 102 29 6 265 1 metQ Methionine-binding lipoprotein MetQ Bacillus subtilis (strain 168)
P54594 4.4e-18 84 27 10 254 3 yhcJ Uncharacterized lipoprotein YhcJ Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06360
Feature type CDS
Gene -
Product MetQ/NlpA family lipoprotein
Location 1392662 - 1393477 (strand: 1)
Length 816 (nucleotides) / 271 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_5
Orthogroup size 22
N. genomes 7

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Genomic region

Domains

PF03180 NlpA lipoprotein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1464 Inorganic ion transport and metabolism (P) P ABC-type metal ion transport system, periplasmic component/surface antigen

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02073 D-methionine transport system substrate-binding protein ABC transporters -

Protein Sequence

MPLHFSGRIFASLLLAGTLLTGCDNNDNNRYAIKVGVINGAEQDVAEVAKKVAKEKYGLEVELVGFSGSLLPNDPTANKELDANVFQHRPFLEQDNRSRGYNLVAVGNTFVFPMAGYSTKIKHPQELKPGDTIALPNDPTNLGRALLLLQKEKLITLNPDSGLLPTTLDIIDNPLKLNIMQLEGAQLPRVLNDPQVTVAIISTTYIQQINLSPTKDSIFIEDKSSPYTNIIVTREDNKEAENVRDFIKAYQSPEVATAAETIFKGGAIQGW

Flanking regions ( +/- flanking 50bp)

ACTGGCTTTAAGCTATTTATAACTAAATAATTTTTAATAGGAATAGCATAATGCCATTACATTTTTCTGGTAGGATTTTTGCGTCTCTTTTATTAGCTGGGACACTATTAACAGGTTGCGATAACAATGATAACAACCGTTATGCAATTAAAGTGGGGGTGATTAATGGTGCAGAGCAAGATGTGGCAGAAGTCGCTAAAAAAGTGGCTAAAGAAAAATATGGTTTAGAGGTTGAGCTGGTGGGTTTTAGTGGCTCATTGTTACCTAACGATCCCACTGCAAACAAAGAATTAGATGCCAATGTGTTCCAACATCGCCCTTTCCTTGAGCAAGATAATCGTTCTCGTGGTTATAACCTCGTCGCGGTAGGCAATACCTTTGTTTTTCCTATGGCAGGTTATTCAACCAAAATTAAACATCCTCAAGAATTAAAACCCGGTGATACAATAGCACTGCCCAATGATCCAACCAACTTGGGGCGCGCATTATTATTGCTACAAAAAGAGAAACTGATCACCTTAAACCCTGACAGTGGCCTATTACCCACAACACTCGATATTATTGATAATCCACTTAAATTAAATATTATGCAATTAGAAGGTGCGCAACTACCACGAGTATTAAACGATCCCCAAGTAACAGTTGCGATAATTAGCACAACTTATATCCAACAAATTAATTTATCACCAACCAAAGACAGTATTTTTATTGAAGATAAAAGTTCACCTTATACTAATATTATTGTTACAAGAGAAGATAATAAAGAAGCAGAGAATGTACGCGATTTTATTAAAGCCTATCAGTCACCCGAAGTGGCAACAGCCGCTGAGACTATTTTTAAAGGTGGTGCTATTCAAGGGTGGTAAACACGACTTATAATTTATCAGGTCACTTATAATAAGTGACCTATTTATTA