Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K02073
Protein list: lists the 22 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_410 | FBDBKF_19935 | 7054 | 7869 | 1 | nlpA | lipoprotein NlpA | Morganella morganii S1 |
1 | group_410 | EHELCC_07680 | 7553 | 8368 | -1 | nlpA | lipoprotein NlpA | Morganella morganii S2 |
2 | group_410 | NLDBIP_08005 | 7553 | 8368 | -1 | nlpA | lipoprotein NlpA | Morganella morganii S4 |
3 | group_410 | LHKJJB_06260 | 248791 | 249606 | 1 | nlpA | lipoprotein NlpA | Morganella morganii S3 |
4 | group_410 | HKOGLL_19115 | 7060 | 7875 | 1 | nlpA | lipoprotein NlpA | Morganella morganii S5 |
5 | group_411 | FBDBKF_05895 | 2766 | 3581 | 1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S1 |
6 | group_411 | EHELCC_08940 | 3338 | 4153 | 1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S2 |
7 | group_411 | NLDBIP_09320 | 3338 | 4153 | 1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S4 |
8 | group_411 | LHKJJB_08435 | 213085 | 213900 | -1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S3 |
9 | group_411 | HKOGLL_07985 | 213085 | 213900 | -1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S5 |
10 | group_202 | FBDBKF_09265 | 84704 | 85507 | -1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S1 |
11 | group_202 | EHELCC_10145 | 60597 | 61400 | 1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S2 |
12 | group_202 | NLDBIP_10490 | 38868 | 39671 | 1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S4 |
13 | group_202 | LHKJJB_10865 | 151857 | 152660 | -1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S3 |
14 | group_202 | HKOGLL_13925 | 85158 | 85961 | -1 | metQ | ABC-type metal ion transport system, periplasmic component/surface antigen | Morganella morganii S5 |
15 | group_410 | F4V73_RS02430 | 513899 | 514714 | -1 | nlpA | lipoprotein NlpA | Morganella psychrotolerans |
16 | group_202 | F4V73_RS10700 | 269956 | 270759 | 1 | MetQ/NlpA family lipoprotein | Morganella psychrotolerans | |
17 | group_411 | F4V73_RS16000 | 209874 | 210689 | -1 | MetQ/NlpA family lipoprotein | Morganella psychrotolerans | |
18 | group_202 | PMI_RS06020 | 1319484 | 1320284 | 1 | MetQ/NlpA family lipoprotein | Proteus mirabilis HI4320 | |
19 | group_410 | PMI_RS06360 | 1392662 | 1393477 | 1 | MetQ/NlpA family lipoprotein | Proteus mirabilis HI4320 | |
20 | group_411 | PMI_RS11165 | 2456987 | 2457802 | 1 | MetQ/NlpA family lipoprotein | Proteus mirabilis HI4320 | |
21 | group_202 | PMI_RS14940 | 3315888 | 3316691 | -1 | MetQ/NlpA family ABC transporter substrate-binding protein | Proteus mirabilis HI4320 |