Homologs in group_411

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05895 FBDBKF_05895 94.8 Morganella morganii S1 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
EHELCC_08940 EHELCC_08940 94.8 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_09320 NLDBIP_09320 94.8 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_08435 LHKJJB_08435 94.8 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_07985 HKOGLL_07985 94.8 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
PMI_RS11165 PMI_RS11165 76.4 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein

Distribution of the homologs in the orthogroup group_411

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_411

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P28635 8.41e-167 465 83 0 271 1 metQ D-methionine-binding lipoprotein MetQ Escherichia coli (strain K12)
Q8X8V9 3.13e-166 464 82 0 271 3 metQ D-methionine-binding lipoprotein MetQ Escherichia coli O157:H7
Q8ZRN1 5.72e-165 460 81 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z992 3.73e-164 458 81 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhi
Q8ZH40 3.77e-162 453 81 0 271 3 metQ D-methionine-binding lipoprotein MetQ Yersinia pestis
P04846 1.91e-116 338 62 0 249 1 nlpA Lipoprotein 28 Escherichia coli (strain K12)
Q8XC50 5.58e-116 337 62 0 249 3 nlpA Lipoprotein 28 Escherichia coli O157:H7
Q9KTJ7 1.51e-112 328 67 1 271 3 metQ Probable D-methionine-binding lipoprotein MetQ Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P31728 2.24e-110 322 58 3 275 1 metQ Probable D-methionine-binding lipoprotein MetQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q08870 8.43e-109 318 59 4 268 3 plpC Outer membrane lipoprotein 3 Mannheimia haemolytica
Q9CK95 2.27e-107 315 55 2 278 3 metQ Probable D-methionine-binding lipoprotein MetQ Pasteurella multocida (strain Pm70)
Q08868 1.56e-98 292 51 4 282 3 plpA Outer membrane lipoprotein 1 Mannheimia haemolytica
Q08869 4.13e-88 266 52 3 270 3 plpB Outer membrane lipoprotein 2 Mannheimia haemolytica
O07950 5.61e-46 158 34 5 269 1 tpn32 Membrane lipoprotein TpN32 Treponema pallidum (strain Nichols)
O32167 2.74e-40 143 36 8 266 1 metQ Methionine-binding lipoprotein MetQ Bacillus subtilis (strain 168)
P54594 1.68e-27 110 28 5 270 3 yhcJ Uncharacterized lipoprotein YhcJ Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16000
Feature type CDS
Gene -
Product MetQ/NlpA family lipoprotein
Location 209874 - 210689 (strand: -1)
Length 816 (nucleotides) / 271 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000005
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_411
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03180 NlpA lipoprotein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1464 Inorganic ion transport and metabolism (P) P ABC-type metal ion transport system, periplasmic component/surface antigen

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02073 D-methionine transport system substrate-binding protein ABC transporters -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG045346 immunogenic lipoprotein A VF0513 Adherence

Protein Sequence

MAFKLKSVVIAGALLGSLVLAGCGQNEKDPKSIKVGVIVGAEQQVAEVAQKVAKDKYGLNVELVTFNDYVMPNEALSRGDIDLNAFQHKPYLDQQIKDRNYKLVPAGNTFVYPIAGYSKKIKSLDELQDGAQVALPNDPTNLGRSLLLLQQQGLITLKEGTGLLPTVLDVAENPKGLKLIELEAPQLPRSLDDNKIDLAIINTTYASQINLTPAKDGLFVEDKNSPYVNIIVSREDNKDSENVKQFVKAYQSDEVFQAADKVFNGGAVKGW

Flanking regions ( +/- flanking 50bp)

TTGCGCCGCACAAACTGCGGATGCACCTTAAACAGAACGAGGAAAAAATAATGGCTTTTAAATTAAAATCGGTTGTCATTGCAGGTGCTTTGCTGGGGTCATTGGTTCTGGCGGGCTGCGGACAAAATGAAAAAGACCCGAAGAGTATTAAAGTGGGCGTTATTGTCGGGGCTGAACAGCAAGTTGCTGAAGTCGCACAAAAAGTCGCAAAAGATAAGTATGGCCTGAATGTTGAGTTAGTCACATTCAATGATTACGTCATGCCGAATGAAGCGCTCAGCCGCGGGGATATTGACCTTAATGCTTTCCAGCATAAGCCGTATCTTGATCAGCAGATTAAAGATCGCAACTATAAATTAGTGCCGGCGGGCAACACGTTTGTTTATCCGATTGCCGGATATTCAAAAAAAATCAAATCACTGGATGAATTACAGGACGGCGCTCAGGTTGCTCTGCCAAATGATCCGACTAATTTAGGCCGCTCTCTGCTGCTGTTGCAGCAACAGGGATTAATCACACTGAAAGAAGGTACAGGTCTGCTGCCGACCGTGCTGGATGTGGCTGAAAACCCGAAAGGATTGAAACTGATTGAGCTGGAAGCCCCTCAGTTACCACGCTCTCTGGATGATAACAAAATCGACCTGGCCATCATCAACACGACCTACGCCAGCCAAATCAACTTAACACCGGCGAAAGACGGTCTGTTCGTTGAAGATAAAAATTCACCTTACGTAAACATTATTGTCTCACGCGAAGATAATAAAGACAGTGAGAATGTGAAGCAGTTTGTTAAGGCATATCAATCAGATGAAGTGTTTCAGGCTGCTGATAAAGTCTTTAACGGTGGTGCGGTAAAAGGCTGGTAATAAGAATAACCGGCAAGTTCTTCCATCTTGAATTGAAGAATATTACACTA