Homologs in group_410

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19935 FBDBKF_19935 100.0 Morganella morganii S1 nlpA lipoprotein NlpA
EHELCC_07680 EHELCC_07680 100.0 Morganella morganii S2 nlpA lipoprotein NlpA
LHKJJB_06260 LHKJJB_06260 100.0 Morganella morganii S3 nlpA lipoprotein NlpA
HKOGLL_19115 HKOGLL_19115 100.0 Morganella morganii S5 nlpA lipoprotein NlpA
F4V73_RS02430 F4V73_RS02430 91.5 Morganella psychrotolerans nlpA lipoprotein NlpA
PMI_RS06360 PMI_RS06360 78.3 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein

Distribution of the homologs in the orthogroup group_410

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_410

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P04846 2.59e-149 421 80 0 249 1 nlpA Lipoprotein 28 Escherichia coli (strain K12)
Q8XC50 3.92e-148 418 79 0 249 3 nlpA Lipoprotein 28 Escherichia coli O157:H7
Q8ZRN1 2.14e-117 340 60 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P28635 2.67e-117 340 60 0 271 1 metQ D-methionine-binding lipoprotein MetQ Escherichia coli (strain K12)
Q8Z992 1.5e-116 338 60 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhi
Q8X8V9 6.94e-116 336 60 0 271 3 metQ D-methionine-binding lipoprotein MetQ Escherichia coli O157:H7
Q8ZH40 7.75e-111 323 61 0 252 3 metQ D-methionine-binding lipoprotein MetQ Yersinia pestis
Q08870 6.21e-92 275 52 2 263 3 plpC Outer membrane lipoprotein 3 Mannheimia haemolytica
P31728 8.46e-92 275 52 4 270 1 metQ Probable D-methionine-binding lipoprotein MetQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CK95 1.01e-91 275 50 3 277 3 metQ Probable D-methionine-binding lipoprotein MetQ Pasteurella multocida (strain Pm70)
Q08868 3.62e-87 263 54 2 241 3 plpA Outer membrane lipoprotein 1 Mannheimia haemolytica
Q9KTJ7 5.73e-84 255 54 1 271 3 metQ Probable D-methionine-binding lipoprotein MetQ Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q08869 4.31e-73 228 47 3 271 3 plpB Outer membrane lipoprotein 2 Mannheimia haemolytica
O07950 4.15e-38 137 31 4 266 1 tpn32 Membrane lipoprotein TpN32 Treponema pallidum (strain Nichols)
O32167 3.09e-21 93 27 7 276 1 metQ Methionine-binding lipoprotein MetQ Bacillus subtilis (strain 168)
P54594 1.03e-20 92 27 9 281 3 yhcJ Uncharacterized lipoprotein YhcJ Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08005
Feature type CDS
Gene nlpA
Product lipoprotein NlpA
Location 7553 - 8368 (strand: -1)
Length 816 (nucleotides) / 271 (amino acids)
In genomic island -

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_410
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03180 NlpA lipoprotein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1464 Inorganic ion transport and metabolism (P) P ABC-type metal ion transport system, periplasmic component/surface antigen

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02073 D-methionine transport system substrate-binding protein ABC transporters -

Protein Sequence

MKKQFSLFFSGAVLALGFLLSGCDKGTTDMTKIKVGVINGAEQDVAEVAKKVAKEKYGLDVELVGFSGSLLPNDPTANGDLDANVFQHRPFLAQDNNARGYNLVAVANTFVFPMAGYSDKIKNISELKTGDTIAMPNDPTNLGRALLLMEKEKLIKLKSGTGLLPTALDITENPLKLNIMELEGAQLPRVIKDPKVTVAIISTTYIQQTGLSPVKDSVFIEDKESPYVNIIVTREDNKDAENVQKFIKAYQSPEVAKAAETLFNGGAVPGW

Flanking regions ( +/- flanking 50bp)

TTACCGCTATTTACTGATACATACTTTCAGTAAACAGAATGGTGAACATAATGAAAAAGCAATTTTCTCTGTTTTTTTCCGGTGCTGTTTTAGCACTGGGATTTTTACTGTCAGGCTGTGATAAGGGCACAACTGACATGACAAAAATTAAAGTCGGTGTGATTAATGGCGCCGAGCAGGATGTGGCTGAGGTTGCCAAAAAAGTGGCCAAAGAAAAATACGGACTGGATGTCGAACTGGTCGGTTTCAGCGGTTCATTGTTACCGAATGATCCGACGGCCAATGGGGATCTTGATGCCAACGTCTTCCAGCATCGCCCGTTCCTGGCCCAGGATAATAACGCCAGAGGTTATAACCTGGTCGCTGTGGCAAATACCTTTGTCTTTCCGATGGCAGGTTATTCCGATAAAATTAAAAATATCAGTGAATTAAAAACCGGTGATACCATTGCCATGCCGAATGACCCGACAAACCTCGGCCGTGCATTATTATTAATGGAAAAAGAGAAGCTGATTAAATTAAAATCCGGCACCGGTTTATTACCGACCGCGCTGGATATTACTGAAAATCCGCTGAAACTGAATATCATGGAGCTGGAAGGCGCTCAGTTACCCCGGGTGATTAAAGATCCGAAAGTCACAGTAGCCATTATCAGTACCACCTATATTCAGCAAACCGGCTTATCCCCGGTAAAAGACAGTGTGTTTATCGAAGATAAAGAATCACCGTACGTCAATATTATTGTGACCCGTGAAGATAATAAAGACGCGGAGAATGTACAAAAATTTATTAAAGCTTATCAGTCACCGGAAGTTGCCAAAGCCGCAGAAACGCTGTTTAACGGCGGCGCCGTTCCCGGCTGGTAATCACGACAATACAGTGCCGGATACTCTCCGGCACTGTCATTCACGCCTCA