Homologs in group_411

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_08940 EHELCC_08940 100.0 Morganella morganii S2 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
NLDBIP_09320 NLDBIP_09320 100.0 Morganella morganii S4 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
LHKJJB_08435 LHKJJB_08435 100.0 Morganella morganii S3 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
HKOGLL_07985 HKOGLL_07985 100.0 Morganella morganii S5 metQ ABC-type metal ion transport system, periplasmic component/surface antigen
F4V73_RS16000 F4V73_RS16000 94.8 Morganella psychrotolerans - MetQ/NlpA family lipoprotein
PMI_RS11165 PMI_RS11165 79.3 Proteus mirabilis HI4320 - MetQ/NlpA family lipoprotein

Distribution of the homologs in the orthogroup group_411

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_411

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P28635 3.07e-167 466 83 0 271 1 metQ D-methionine-binding lipoprotein MetQ Escherichia coli (strain K12)
Q8X8V9 4.91e-167 466 83 0 271 3 metQ D-methionine-binding lipoprotein MetQ Escherichia coli O157:H7
Q8ZRN1 9.38e-166 462 83 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z992 4.03e-165 461 82 0 271 3 metQ D-methionine-binding lipoprotein MetQ Salmonella typhi
Q8ZH40 1.15e-161 452 81 0 271 3 metQ D-methionine-binding lipoprotein MetQ Yersinia pestis
P31728 1.98e-114 333 60 3 275 1 metQ Probable D-methionine-binding lipoprotein MetQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P04846 3.6e-114 332 61 0 249 1 nlpA Lipoprotein 28 Escherichia coli (strain K12)
Q8XC50 1.48e-113 330 61 0 249 3 nlpA Lipoprotein 28 Escherichia coli O157:H7
Q08870 5.01e-113 328 60 4 268 3 plpC Outer membrane lipoprotein 3 Mannheimia haemolytica
Q9KTJ7 7.86e-112 326 67 1 271 3 metQ Probable D-methionine-binding lipoprotein MetQ Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9CK95 2.73e-111 325 56 2 278 3 metQ Probable D-methionine-binding lipoprotein MetQ Pasteurella multocida (strain Pm70)
Q08868 1.34e-99 295 52 4 282 3 plpA Outer membrane lipoprotein 1 Mannheimia haemolytica
Q08869 1.94e-90 272 53 3 273 3 plpB Outer membrane lipoprotein 2 Mannheimia haemolytica
O07950 5.34e-47 160 35 5 269 1 tpn32 Membrane lipoprotein TpN32 Treponema pallidum (strain Nichols)
O32167 8.41e-37 134 35 8 268 1 metQ Methionine-binding lipoprotein MetQ Bacillus subtilis (strain 168)
P54594 5.02e-27 108 28 6 269 3 yhcJ Uncharacterized lipoprotein YhcJ Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_05895
Feature type CDS
Gene metQ
Product ABC-type metal ion transport system, periplasmic component/surface antigen
Location 2766 - 3581 (strand: 1)
Length 816 (nucleotides) / 271 (amino acids)
In genomic island -

Contig

Accession contig_6
Length 178871 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_411
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03180 NlpA lipoprotein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1464 Inorganic ion transport and metabolism (P) P ABC-type metal ion transport system, periplasmic component/surface antigen

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02073 D-methionine transport system substrate-binding protein ABC transporters -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG045346 immunogenic lipoprotein A VF0513 Adherence

Protein Sequence

MAFKLKSLVVAGALLGSLVLAGCGQNEKDPKSIKVGVIVGAEQQVAEVAKKVAKDKYGLNVELVTFNDYVMPNEALSRGDIDLNAFQHKPYLDQQIKDRNYKLTPVGNTFVYPIAGYSKKIKSLDELQDGAQVALPNDPTNLGRSLLLLQKQGLIKLKEGTGLLPTVLDVVENPKGLKLIELEAPQLPRSLDDNKIDLAVINTTYASQINLTPAKDGLFVEDKDSPYVNIIVSREDNKDSEAVKQFVQAYQSDEVFNEADKVFNGGAVKGW

Flanking regions ( +/- flanking 50bp)

CGCGCCGCACTGACTGCGAACGCGTATTAAACAGAACGAGGAAAGAAAAGATGGCTTTTAAATTAAAATCGCTTGTCGTTGCCGGTGCTTTGCTGGGTTCATTAGTGCTGGCGGGTTGCGGACAGAATGAAAAAGATCCGAAAAGTATCAAAGTCGGCGTGATCGTCGGTGCTGAACAGCAGGTGGCAGAAGTGGCGAAAAAAGTCGCCAAAGACAAATACGGCCTGAATGTGGAACTGGTTACGTTCAACGACTACGTCATGCCGAACGAAGCGCTCAGCCGTGGTGATATCGATCTGAACGCATTCCAGCACAAGCCGTATCTGGATCAGCAGATTAAAGACCGTAACTACAAATTAACTCCGGTGGGCAATACCTTTGTTTATCCGATTGCCGGTTATTCAAAGAAAATCAAATCACTGGATGAATTACAGGACGGCGCACAGGTCGCTCTGCCGAATGACCCGACTAACCTCGGCCGTTCACTGCTGTTATTACAGAAGCAGGGATTAATCAAACTGAAAGAAGGCACCGGTCTGCTGCCGACAGTTCTTGATGTGGTTGAAAACCCGAAAGGTCTGAAACTGATCGAGCTGGAAGCCCCGCAACTGCCGCGTTCACTGGATGATAATAAGATCGACCTGGCCGTGATCAACACCACTTACGCCAGCCAGATCAACTTAACCCCGGCTAAAGACGGCTTATTTGTTGAAGATAAAGATTCACCTTACGTCAACATTATTGTCTCCCGCGAAGATAATAAAGACAGTGAAGCGGTGAAACAATTTGTTCAGGCATATCAGTCTGATGAAGTCTTTAACGAAGCAGATAAAGTCTTCAACGGCGGTGCGGTGAAAGGCTGGTAAAAGACCGGGAGTTCAGAATAACTGCTAAGTTCTTTTATCTTTAATCAAAG