PF13247


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13247, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 71 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13247
Description 4Fe-4S dicluster domain

Occurence in the database

PF13247 is associated with 71 different proteins (see tab "Protein list" and "Profile")
The 71 proteins are classified into 8 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_494 FBDBKF_00895 162198 162935 -1 ttrB tetrathionate reductase subunit TtrB Morganella morganii S1
1 group_785 FBDBKF_03635 129999 130547 -1 hydN electron transport protein HydN Morganella morganii S1
2 group_63 FBDBKF_04805 165638 167602 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S1
3 group_71 FBDBKF_08055 146934 147824 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S1
4 group_21 FBDBKF_08075 154744 155385 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S1
5 group_21 FBDBKF_10455 48339 48956 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S1
6 group_2927 FBDBKF_14030 102822 103301 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S1
7 group_71 FBDBKF_16125 15718 16659 1 fdxH formate dehydrogenase subunit beta Morganella morganii S1
8 group_2404 FBDBKF_19270 1658 2641 1 hybA hydrogenase 2 operon protein HybA Morganella morganii S1
9 group_2431 FBDBKF_19650 13669 15225 -1 narH nitrate reductase subunit beta Morganella morganii S1
10 group_494 EHELCC_00650 145933 146670 1 ttrB tetrathionate reductase subunit TtrB Morganella morganii S2
11 group_63 EHELCC_06095 225095 227059 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S2
12 group_785 EHELCC_06900 116556 117104 1 hydN electron transport protein HydN Morganella morganii S2
13 group_2404 EHELCC_07555 248749 249732 1 hybA hydrogenase 2 operon protein HybA Morganella morganii S2
14 group_2927 EHELCC_11705 187698 188177 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S2
15 group_71 EHELCC_13885 121128 122018 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S2
16 group_21 EHELCC_13905 128938 129579 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S2
17 group_21 EHELCC_14790 48329 48946 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S2
18 group_71 EHELCC_16160 15718 16659 1 fdxH formate dehydrogenase subunit beta Morganella morganii S2
19 group_2431 EHELCC_16940 48896 50452 -1 narH nitrate reductase subunit beta Morganella morganii S2
20 group_494 NLDBIP_02810 533466 534203 -1 ttrB tetrathionate reductase subunit TtrB Morganella morganii S4
21 group_63 NLDBIP_06415 266160 268124 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S4
22 group_785 NLDBIP_07225 116429 116977 1 hydN electron transport protein HydN Morganella morganii S4
23 group_2404 NLDBIP_07880 248622 249605 1 hybA hydrogenase 2 operon protein HybA Morganella morganii S4
24 group_2927 NLDBIP_12045 187698 188177 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S4
25 group_71 NLDBIP_14330 142003 142893 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S4
26 group_21 NLDBIP_14350 149813 150454 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S4
27 group_21 NLDBIP_14620 48329 48946 1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S4
28 group_71 NLDBIP_17180 45511 46452 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S4
29 group_2431 NLDBIP_17510 5314 6870 1 narH nitrate reductase subunit beta Morganella morganii S4
30 group_63 LHKJJB_03295 243684 245648 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S3
31 group_494 LHKJJB_04325 140707 141444 -1 ttrB tetrathionate reductase subunit TtrB Morganella morganii S3
32 group_785 LHKJJB_06760 80175 80723 1 hydN electron transport protein HydN Morganella morganii S3
33 group_2404 LHKJJB_07415 212368 213351 1 hybA hydrogenase 2 operon protein HybA Morganella morganii S3
34 group_21 LHKJJB_08500 9295 9936 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S3
35 group_71 LHKJJB_08520 16856 17746 1 fdxH formate dehydrogenase subunit beta Morganella morganii S3
36 group_2927 LHKJJB_11905 187698 188177 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S3
37 group_21 LHKJJB_14725 92780 93397 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S3
38 group_71 LHKJJB_17100 48613 49554 -1 fdxH formate dehydrogenase subunit beta Morganella morganii S3
39 group_2431 LHKJJB_17430 5314 6870 1 narH nitrate reductase subunit beta Morganella morganii S3
40 group_494 HKOGLL_02720 146138 146875 1 ttrB tetrathionate reductase subunit TtrB Morganella morganii S5
41 group_2404 HKOGLL_03515 20036 21019 -1 hybA hydrogenase 2 operon protein HybA Morganella morganii S5
42 group_785 HKOGLL_04170 152664 153212 -1 hydN electron transport protein HydN Morganella morganii S5
43 group_63 HKOGLL_06770 165548 167512 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S5
44 group_21 HKOGLL_08050 9295 9936 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S5
45 group_71 HKOGLL_08070 16856 17746 1 fdxH formate dehydrogenase subunit beta Morganella morganii S5
46 group_2927 HKOGLL_10520 187698 188177 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S5
47 group_21 HKOGLL_13345 92780 93397 -1 dmsB DMSO/selenate family reductase complex B subunit Morganella morganii S5
48 group_71 HKOGLL_16740 15718 16659 1 fdxH formate dehydrogenase subunit beta Morganella morganii S5
49 group_2431 HKOGLL_17245 5314 6870 1 narH nitrate reductase subunit beta Morganella morganii S5
50 group_21 F4V73_RS05065 1078300 1078929 -1 DMSO/selenate family reductase complex B subunit Morganella psychrotolerans
51 group_494 F4V73_RS06890 1427951 1428691 -1 ttrB tetrathionate reductase subunit TtrB Morganella psychrotolerans
52 group_63 F4V73_RS09275 1945279 1947243 -1 FAD-dependent oxidoreductase Morganella psychrotolerans
53 group_2431 F4V73_RS10445 201737 203293 -1 narH nitrate reductase subunit beta Morganella psychrotolerans
54 group_785 F4V73_RS11230 388080 388628 1 hydN electron transport protein HydN Morganella psychrotolerans
55 group_2404 F4V73_RS12030 560368 561351 1 hybA hydrogenase 2 operon protein HybA Morganella psychrotolerans
56 group_2927 F4V73_RS12880 180947 181489 -1 DMSO/selenate family reductase complex B subunit Morganella psychrotolerans
57 group_21 F4V73_RS12920 190347 190991 -1 DMSO/selenate family reductase complex B subunit Morganella psychrotolerans
58 group_71 F4V73_RS12940 198029 198922 1 fdxH formate dehydrogenase subunit beta Morganella psychrotolerans
59 group_21 F4V73_RS14155 46639 47256 1 DMSO/selenate family reductase complex B subunit Morganella psychrotolerans
60 group_71 F4V73_RS17490 129541 130482 -1 fdxH formate dehydrogenase subunit beta Morganella psychrotolerans
61 group_2404 PMI_RS00155 54497 55510 1 hybA hydrogenase 2 operon protein HybA Proteus mirabilis HI4320
62 group_21 PMI_RS00325 94470 95141 -1 4Fe-4S dicluster domain-containing protein Proteus mirabilis HI4320
63 group_21 PMI_RS00340 98095 98724 -1 ferredoxin-like protein Proteus mirabilis HI4320
64 group_21 PMI_RS00820 205660 206211 -1 4Fe-4S dicluster domain-containing protein Proteus mirabilis HI4320
65 group_21 PMI_RS05815 1273028 1273657 1 dmsB dimethylsulfoxide reductase subunit B Proteus mirabilis HI4320
66 group_494 PMI_RS08235 1799361 1800101 -1 ttrB tetrathionate reductase subunit TtrB Proteus mirabilis HI4320
67 group_21 PMI_RS08350 1825237 1825854 1 dmsB dimethylsulfoxide reductase subunit B Proteus mirabilis HI4320
68 group_21 PMI_RS14660 3249614 3250255 1 dmsB dimethylsulfoxide reductase subunit B Proteus mirabilis HI4320
69 group_71 PMI_RS15390 3419073 3420011 -1 fdxH formate dehydrogenase subunit beta Proteus mirabilis HI4320
70 group_2431 PMI_RS17770 3903022 3904575 1 narH nitrate reductase subunit beta Proteus mirabilis HI4320