Orthogroup:group_52


Homologs in group_52

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11085 FBDBKF_11085 Morganella morganii S1 - TonB-dependent receptor
FBDBKF_14795 FBDBKF_14795 Morganella morganii S1 fepA ligand-gated channel protein
EHELCC_05140 EHELCC_05140 Morganella morganii S2 - Colicin I receptor
EHELCC_15600 EHELCC_15600 Morganella morganii S2 fepA ligand-gated channel protein
NLDBIP_05460 NLDBIP_05460 Morganella morganii S4 - TonB-dependent receptor
NLDBIP_16130 NLDBIP_16130 Morganella morganii S4 fepA ligand-gated channel protein
LHKJJB_02340 LHKJJB_02340 Morganella morganii S3 - TonB-dependent receptor
LHKJJB_15710 LHKJJB_15710 Morganella morganii S3 fepA ligand-gated channel protein
HKOGLL_14830 HKOGLL_14830 Morganella morganii S5 fepA ligand-gated channel protein
HKOGLL_15720 HKOGLL_15720 Morganella morganii S5 - TonB-dependent receptor
F4V73_RS07595 F4V73_RS07595 Morganella psychrotolerans - ligand-gated channel protein
F4V73_RS08185 F4V73_RS08185 Morganella psychrotolerans - TonB-dependent receptor
PMI_RS04135 PMI_RS04135 Proteus mirabilis HI4320 - ligand-gated channel protein
PMI_RS09585 PMI_RS09585 Proteus mirabilis HI4320 - IreA family TonB-dependent siderophore receptor

Distribution of group_52 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_52 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_52

Orthogroup content: 14 members

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This page summarizes the annotation of all members of the orthologous group group_52.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 9
2 fepA 5

Product

# Product Occurence
1 TonB-dependent receptor 5
2 ligand-gated channel protein 7
3 Colicin I receptor 1
4 IreA family TonB-dependent siderophore receptor 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4771 14 P Inorganic ion transport and metabolism (P) Outer membrane receptor for ferrienterochelin and colicins

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K16089 14 outer membrane receptor for ferrienterochelin and colicins - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00593 14 TonB dependent receptor-like, beta-barrel
PF07715 14 TonB-dependent Receptor Plug Domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG012633 6 TonB-dependent siderophore receptor IreA VF1117 Nutritional/Metabolic factor

Annotations of the 86 SwissProt hits

Annotation Number of occurrences
Catecholate siderophore receptor Fiu 4
Colicin I receptor 1
Fe(3+) dicitrate transport protein FecA 1
Ferric aerobactin receptor 2
Ferric enterobactin receptor 1
Ferric enterobactin receptor PirA 1
Ferric vulnibactin receptor VuuA 1
Ferric-pyoverdine 358 receptor 1
Ferric-pyoverdine BN7/BN8 receptor 1
Ferrichrome outer membrane transporter/phage receptor 1
Ferrichrysobactin receptor 1
Ferrienterobactin receptor 1
Ferrioxamine B receptor 2
Ferrioxamine receptor 1
Ferripyoverdine receptor 1
Heme/hemopexin utilization protein C 3
Hemin receptor 2
Hemoglobin and hemoglobin-haptoglobin-binding protein 1
Hemoglobin and hemoglobin-haptoglobin-binding protein A 1
Hemoglobin and hemoglobin-haptoglobin-binding protein B 1
Hydroxamate siderophore receptor FhuE 1
Iron and copper transporter IacT 1
Iron-regulated outer membrane virulence protein 2
Metal-pseudopaline receptor CntO 2
Pesticin receptor 3
Probable TonB-dependent receptor BfrD 1
Probable TonB-dependent siderophore receptor PirA 1
Probable TonB-dependent siderophore receptor PiuA 2
Probable hemoglobin and hemoglobin-haptoglobin-binding protein 1 1
Protein YoeA 1
Pyrroloquinoline quinone transporter 1
Rhizobactin receptor 1
Schizokinen transporter SchT 1
TonB-dependent heme receptor A 1
Transferrin-binding protein A 2
Uncharacterized TonB-dependent receptor HI_1466.1 1
Vitamin B12 transporter BtuB 36

Protein length

Min length 654
Max length 693
Mean length (sd) 668.1 (13.9)
Median length 669.5

Protein length distribution