Orthogroup:group_407


Homologs in group_407

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10455 FBDBKF_10455 Morganella morganii S1 dmsB DMSO/selenate family reductase complex B subunit
EHELCC_14790 EHELCC_14790 Morganella morganii S2 dmsB DMSO/selenate family reductase complex B subunit
NLDBIP_14620 NLDBIP_14620 Morganella morganii S4 dmsB DMSO/selenate family reductase complex B subunit
LHKJJB_14725 LHKJJB_14725 Morganella morganii S3 dmsB DMSO/selenate family reductase complex B subunit
HKOGLL_13345 HKOGLL_13345 Morganella morganii S5 dmsB DMSO/selenate family reductase complex B subunit
F4V73_RS14155 F4V73_RS14155 Morganella psychrotolerans - DMSO/selenate family reductase complex B subunit
PMI_RS08350 PMI_RS08350 Proteus mirabilis HI4320 dmsB dimethylsulfoxide reductase subunit B

Distribution of group_407 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_407 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_407

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_407.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dmsB 6
2 - 1

Product

# Product Occurence
1 DMSO/selenate family reductase complex B subunit 6
2 dimethylsulfoxide reductase subunit B 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0437 7 C Energy production and conversion (C) Fe-S-cluster-containing dehydrogenase component (DMSO reductase)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07307 7 anaerobic dimethyl sulfoxide reductase subunit B Sulfur metabolism
Metabolic pathways
Microbial metabolism in diverse environments		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF12797 6 4Fe-4S binding domain
PF13247 7 4Fe-4S dicluster domain

Annotations of the 70 SwissProt hits

Annotation Number of occurrences
Anaerobic dimethyl sulfoxide reductase chain B 3
Arsenate respiratory reductase iron-sulfur subunit ArrB 1
Chlorate reductase subunit beta 1
Dimethylsulfide dehydrogenase subunit beta 1
Electron transport protein HydN 3
Ferredoxin 3
Formate dehydrogenase 2 subunit beta (cytochrome c-553) 1
Formate dehydrogenase iron-sulfur subunit 2
Formate dehydrogenase subunit beta 1
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit 2
Formate dehydrogenase-O iron-sulfur subunit 3
Formate hydrogenlyase subunit 2 3
Frd operon probable iron-sulfur subunit A (Fragment) 1
Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 1
Hydrogenase-2 operon protein HybA 3
Hydrogenase-4 component A 1
Iron-sulfur protein 1
Ketoisovalerate oxidoreductase subunit VorD 1
Menaquinone reductase, iron-sulfur cluster-binding subunit 1
NADH-dependent phenylglyoxylate dehydrogenase subunit beta 1
Nitrate reductase beta chain 1
Perchlorate reductase subunit beta 1
Polysulfide reductase chain B 1
Probable anaerobic dimethyl sulfoxide reductase chain YnfG 2
Protein DVU_0535 1
Protein NrfC 3
Protein NrfC homolog 1
Putative dimethyl sulfoxide reductase iron-sulfur subunit B 1
Putative electron transport protein YgfS 1
Putative electron transport protein YsaA 1
Putative oxidoreductase AegA 1
Putative oxidoreductase UacF 1
Pyrogallol hydroxytransferase small subunit 1
Respiratory nitrate reductase 1 beta chain 2
Respiratory nitrate reductase 2 beta chain 1
Respiratory nitrate reductase beta chain (Fragments) 1
Respiratory nitrate reductase subunit beta 1
Selenate reductase subunit beta 1
Sulfite dehydrogenase subunit B 1
Tetrathionate reductase subunit B 2
Thiosulfate reductase electron transfer subunit PhsB 2
Uncharacterized ferredoxin MJ0155 1
Uncharacterized ferredoxin MJ0265 1
Uncharacterized ferredoxin-like protein YdhX 2
Uncharacterized ferredoxin-like protein YdhY 3
Uncharacterized polyferredoxin-like protein MJ0514 1
Uncharacterized protein MJ0264 1

Protein length

Unique protein length 205

Protein length distribution