PF00662


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00662, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00662
Description NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus

Occurence in the database

PF00662 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_793 FBDBKF_03720 146179 147759 -1 hydrogenase 4 subunit F Morganella morganii S1
1 group_795 FBDBKF_03730 148427 149869 -1 nuoL hydrogenase 4 subunit D Morganella morganii S1
2 group_1889 FBDBKF_14115 17720 19561 -1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S1
3 group_795 EHELCC_06805 97234 98676 1 nuoL hydrogenase 4 subunit D Morganella morganii S2
4 group_793 EHELCC_06815 99344 100924 1 hydrogenase 4 subunit F Morganella morganii S2
5 group_1889 EHELCC_08165 97424 99265 1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S2
6 group_795 NLDBIP_07130 97107 98549 1 nuoL hydrogenase 4 subunit D Morganella morganii S4
7 group_793 NLDBIP_07140 99217 100797 1 hydrogenase 4 subunit F Morganella morganii S4
8 group_1889 NLDBIP_08490 97424 99265 1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S4
9 group_1889 LHKJJB_05775 157894 159735 -1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S3
10 group_795 LHKJJB_06665 60853 62295 1 nuoL hydrogenase 4 subunit D Morganella morganii S3
11 group_793 LHKJJB_06675 62963 64543 1 hydrogenase 4 subunit F Morganella morganii S3
12 group_793 HKOGLL_04255 168844 170424 -1 hydrogenase 4 subunit F Morganella morganii S5
13 group_795 HKOGLL_04265 171092 172534 -1 nuoL hydrogenase 4 subunit D Morganella morganii S5
14 group_1889 HKOGLL_05140 82015 83856 1 nuoL NADH-quinone oxidoreductase subunit L Morganella morganii S5
15 group_1889 F4V73_RS02820 594803 596644 1 nuoL NADH-quinone oxidoreductase subunit L Morganella psychrotolerans
16 group_795 F4V73_RS11140 367568 369010 1 hydrogenase 4 subunit D Morganella psychrotolerans
17 group_793 F4V73_RS11150 369678 371258 1 hydrogenase 4 subunit F Morganella psychrotolerans
18 group_1889 PMI_RS08595 1876718 1878553 -1 nuoL NADH-quinone oxidoreductase subunit L Proteus mirabilis HI4320
19 group_793 PMI_RS12475 2765532 2767100 -1 hydrogenase 4 subunit F Proteus mirabilis HI4320
20 group_795 PMI_RS12485 2767767 2769215 -1 hydrogenase 4 subunit D Proteus mirabilis HI4320