PF00462


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00462, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00462
Description Glutaredoxin

Occurence in the database

PF00462 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1021 FBDBKF_05710 147684 148025 -1 grxD Grx4 family monothiol glutaredoxin Morganella morganii S1
1 group_1203 FBDBKF_06985 62597 62860 -1 grxA GrxA family glutaredoxin Morganella morganii S1
2 group_1564 FBDBKF_10140 118743 118961 1 nrdH Glutaredoxin Morganella morganii S1
3 group_1203 EHELCC_03985 123326 123589 1 grxA GrxA family glutaredoxin Morganella morganii S2
4 group_1564 EHELCC_04940 310708 310926 1 nrdH Glutaredoxin Morganella morganii S2
5 group_1021 EHELCC_11880 33469 33810 1 grxD Grx4 family monothiol glutaredoxin Morganella morganii S2
6 group_1203 NLDBIP_03985 123122 123385 1 grxA GrxA family glutaredoxin Morganella morganii S4
7 group_1564 NLDBIP_04940 310504 310722 1 nrdH Glutaredoxin Morganella morganii S4
8 group_1021 NLDBIP_12220 33424 33765 1 grxD Grx4 family monothiol glutaredoxin Morganella morganii S4
9 group_1203 LHKJJB_09815 123236 123499 1 grxA GrxA family glutaredoxin Morganella morganii S3
10 group_1021 LHKJJB_12080 33469 33810 1 grxD Grx4 family monothiol glutaredoxin Morganella morganii S3
11 group_1564 LHKJJB_13690 24656 24874 -1 nrdH Glutaredoxin Morganella morganii S3
12 group_1203 HKOGLL_09160 67553 67816 -1 grxA GrxA family glutaredoxin Morganella morganii S5
13 group_1021 HKOGLL_10695 33469 33810 1 grxD Grx4 family monothiol glutaredoxin Morganella morganii S5
14 group_1564 HKOGLL_12845 119524 119742 1 nrdH Glutaredoxin Morganella morganii S5
15 group_1564 F4V73_RS00200 52210 52431 -1 nrdH glutaredoxin-like protein NrdH Morganella psychrotolerans
16 group_1203 F4V73_RS01175 250076 250339 -1 GrxA family glutaredoxin Morganella psychrotolerans
17 group_1021 F4V73_RS03595 766607 766945 1 Grx4 family monothiol glutaredoxin Morganella psychrotolerans
18 group_1564 PMI_RS02050 485170 485394 -1 nrdH glutaredoxin-like protein NrdH Proteus mirabilis HI4320
19 group_1203 PMI_RS03320 734844 735107 -1 GrxA family glutaredoxin Proteus mirabilis HI4320
20 group_1021 PMI_RS06735 1470977 1471315 -1 Grx4 family monothiol glutaredoxin Proteus mirabilis HI4320