Orthogroup:group_1612


Homologs in group_1612

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10605 FBDBKF_10605 Morganella morganii S1 atoE Short chain fatty acids transporter
EHELCC_14940 EHELCC_14940 Morganella morganii S2 atoE Short chain fatty acids transporter
NLDBIP_14770 NLDBIP_14770 Morganella morganii S4 atoE Short chain fatty acids transporter
LHKJJB_14575 LHKJJB_14575 Morganella morganii S3 atoE Short chain fatty acids transporter
HKOGLL_13195 HKOGLL_13195 Morganella morganii S5 atoE Short chain fatty acids transporter
F4V73_RS14315 F4V73_RS14315 Morganella psychrotolerans - TIGR00366 family protein
PMI_RS15250 PMI_RS15250 Proteus mirabilis HI4320 - AbgT family transporter

Distribution of group_1612 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1612 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1612

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1612.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 atoE 5
2 - 2

Product

# Product Occurence
1 Short chain fatty acids transporter 5
2 TIGR00366 family protein 1
3 AbgT family transporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1288 1 R General function prediction only (R) Predicted membrane transporter YfcC, affects glyoxylate shunt
COG2031 6 I Lipid transport and metabolism (I) Short chain fatty acids transporter

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02106 6 short-chain fatty acids transporter Two-component system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02667 6 Short chain fatty acid transporter
PF03606 1 C4-dicarboxylate anaerobic carrier

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Putative basic amino acid antiporter YfcC 1
Putative short-chain fatty acid transporter 2
Uncharacterized protein HI_0594 1
Uncharacterized protein YcgA 1

Protein length

Min length 440
Max length 468
Mean length (sd) 444.0 (10.6)
Median length 440.0

Protein length distribution