Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K15580
Protein list: lists the 21 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_416 | FBDBKF_05570 | 121453 | 123087 | -1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S1 |
1 | group_416 | EHELCC_12020 | 58407 | 60041 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S2 |
2 | group_416 | NLDBIP_12360 | 58362 | 59996 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S4 |
3 | group_416 | LHKJJB_12220 | 58407 | 60041 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S3 |
4 | group_416 | HKOGLL_10835 | 58407 | 60041 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S5 |
5 | group_418 | FBDBKF_05300 | 65428 | 67059 | -1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S1 |
6 | group_418 | EHELCC_12290 | 114435 | 116066 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S2 |
7 | group_418 | NLDBIP_12630 | 114390 | 116021 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S4 |
8 | group_418 | LHKJJB_12490 | 114435 | 116066 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S3 |
9 | group_418 | HKOGLL_11105 | 114435 | 116066 | 1 | oppA | ABC-type oligopeptide transport system, periplasmic component | Morganella morganii S5 |
10 | group_417 | FBDBKF_05295 | 63660 | 65306 | -1 | oppA | oligopeptide ABC transporter substrate-binding protein OppA | Morganella morganii S1 |
11 | group_417 | EHELCC_12295 | 116188 | 117834 | 1 | oppA | oligopeptide ABC transporter substrate-binding protein OppA | Morganella morganii S2 |
12 | group_417 | NLDBIP_12635 | 116143 | 117789 | 1 | oppA | oligopeptide ABC transporter substrate-binding protein OppA | Morganella morganii S4 |
13 | group_417 | LHKJJB_12495 | 116188 | 117834 | 1 | oppA | oligopeptide ABC transporter substrate-binding protein OppA | Morganella morganii S3 |
14 | group_417 | HKOGLL_11110 | 116188 | 117834 | 1 | oppA | oligopeptide ABC transporter substrate-binding protein OppA | Morganella morganii S5 |
15 | group_416 | F4V73_RS03735 | 792389 | 793945 | 1 | peptide ABC transporter substrate-binding protein | Morganella psychrotolerans | |
16 | group_417 | F4V73_RS05750 | 1220423 | 1222063 | -1 | oppA | oligopeptide ABC transporter substrate-binding protein OppA | Morganella psychrotolerans |
17 | group_418 | F4V73_RS05755 | 1222185 | 1223816 | -1 | ABC transporter substrate-binding protein | Morganella psychrotolerans | |
18 | group_416 | PMI_RS06600 | 1445339 | 1446958 | -1 | peptide ABC transporter substrate-binding protein | Proteus mirabilis HI4320 | |
19 | group_417 | PMI_RS07140 | 1558636 | 1560273 | -1 | oppA | oligopeptide ABC transporter substrate-binding protein OppA | Proteus mirabilis HI4320 |
20 | group_418 | PMI_RS07145 | 1560540 | 1562180 | -1 | ABC transporter substrate-binding protein | Proteus mirabilis HI4320 |