Homologs in group_9

Help

20 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05295 FBDBKF_05295 57.6 Morganella morganii S1 oppA oligopeptide ABC transporter substrate-binding protein OppA
FBDBKF_05300 FBDBKF_05300 100.0 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
FBDBKF_05570 FBDBKF_05570 42.6 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12020 EHELCC_12020 42.6 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12290 EHELCC_12290 100.0 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12295 EHELCC_12295 57.6 Morganella morganii S2 oppA oligopeptide ABC transporter substrate-binding protein OppA
NLDBIP_12360 NLDBIP_12360 42.6 Morganella morganii S4 oppA ABC-type oligopeptide transport system, periplasmic component
NLDBIP_12635 NLDBIP_12635 57.6 Morganella morganii S4 oppA oligopeptide ABC transporter substrate-binding protein OppA
LHKJJB_12220 LHKJJB_12220 42.6 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12490 LHKJJB_12490 100.0 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12495 LHKJJB_12495 57.6 Morganella morganii S3 oppA oligopeptide ABC transporter substrate-binding protein OppA
HKOGLL_10835 HKOGLL_10835 42.6 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11105 HKOGLL_11105 100.0 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11110 HKOGLL_11110 57.6 Morganella morganii S5 oppA oligopeptide ABC transporter substrate-binding protein OppA
F4V73_RS03735 F4V73_RS03735 43.1 Morganella psychrotolerans - peptide ABC transporter substrate-binding protein
F4V73_RS05750 F4V73_RS05750 57.5 Morganella psychrotolerans oppA oligopeptide ABC transporter substrate-binding protein OppA
F4V73_RS05755 F4V73_RS05755 87.3 Morganella psychrotolerans - ABC transporter substrate-binding protein
PMI_RS06600 PMI_RS06600 43.5 Proteus mirabilis HI4320 - peptide ABC transporter substrate-binding protein
PMI_RS07140 PMI_RS07140 58.1 Proteus mirabilis HI4320 oppA oligopeptide ABC transporter substrate-binding protein OppA
PMI_RS07145 PMI_RS07145 65.4 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_9

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_9

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23843 0.0 669 59 1 535 1 oppA Periplasmic oligopeptide-binding protein OppA Escherichia coli (strain K12)
P06202 0.0 655 58 0 514 1 oppA Periplasmic oligopeptide-binding protein OppA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P71370 0.0 566 51 4 540 3 oppA Periplasmic oligopeptide-binding protein OppA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P77348 5.44e-162 474 45 6 542 1 mppA Periplasmic murein peptide-binding protein MppA Escherichia coli (strain K12)
Q46863 2.23e-140 419 41 3 517 1 ygiS Probable deoxycholate-binding periplasmic protein YgiS Escherichia coli (strain K12)
P24141 1.76e-71 241 29 15 540 1 oppA Oligopeptide-binding protein OppA Bacillus subtilis (strain 168)
P26906 5.34e-68 231 30 16 546 1 dppE Dipeptide-binding protein DppE Bacillus subtilis (strain 168)
P44572 2.36e-66 226 29 12 500 3 HI_0213 Putative binding protein HI_0213 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A2RI74 6.26e-46 172 28 21 567 1 dppA Dipeptide-binding protein Lactococcus lactis subsp. cremoris (strain MG1363)
P33590 1.43e-30 128 25 15 476 1 nikA Nickel-binding periplasmic protein Escherichia coli (strain K12)
P76128 9.5e-30 126 25 13 545 2 ddpA Probable D,D-dipeptide-binding periplasmic protein DdpA Escherichia coli (strain K12)
A0A0H2ZGV7 2.37e-29 125 25 16 477 1 dppA4 Di/tripeptide-binding protein 4 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q8Z863 1.36e-26 116 24 13 519 3 gsiB Glutathione-binding protein GsiB Salmonella typhi
Q57RB1 1.82e-26 116 24 13 520 3 gsiB Glutathione-binding protein GsiB Salmonella choleraesuis (strain SC-B67)
Q9HVS4 1.87e-26 116 22 16 491 1 PA4497 Tripeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGW2 2.34e-26 116 22 16 491 1 dppA2 Di/tripeptide-binding protein 2 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q8ZQM3 2.34e-26 115 24 13 519 3 gsiB Glutathione-binding protein GsiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q32IB6 5.39e-26 115 23 10 496 3 gsiB Glutathione-binding protein GsiB Shigella dysenteriae serotype 1 (strain Sd197)
Q5PGP4 6.61e-26 114 24 13 520 3 gsiB Glutathione-binding protein GsiB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8X6V9 1.95e-25 113 23 10 496 3 gsiB Glutathione-binding protein GsiB Escherichia coli O157:H7
Q1RE95 3.31e-25 112 23 11 526 3 gsiB Glutathione-binding protein GsiB Escherichia coli (strain UTI89 / UPEC)
Q8CW88 3.31e-25 112 23 11 526 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A968 3.31e-25 112 23 11 526 3 gsiB Glutathione-binding protein GsiB Escherichia coli O1:K1 / APEC
P75797 4.53e-25 112 23 11 497 1 gsiB Glutathione-binding protein GsiB Escherichia coli (strain K12)
Q323W4 4.87e-25 112 23 10 496 3 gsiB Glutathione-binding protein GsiB Shigella boydii serotype 4 (strain Sb227)
Q3Z3V3 1.13e-24 110 23 10 496 3 gsiB Glutathione-binding protein GsiB Shigella sonnei (strain Ss046)
Q821B3 1.99e-24 110 23 10 496 3 gsiB Glutathione-binding protein GsiB Shigella flexneri
Q0TJL8 3.1e-24 109 23 10 496 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P06109 3.46e-24 109 25 15 486 3 xp55 Protein XP55 Streptomyces lividans
P31306 6.94e-24 109 27 9 305 1 sarA Oligopeptide-binding protein SarA Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
Q6D3B0 1.08e-23 108 23 12 499 3 gsiB Glutathione-binding protein GsiB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q0T6D2 2.45e-23 107 23 10 497 3 gsiB Glutathione-binding protein GsiB Shigella flexneri serotype 5b (strain 8401)
P0A4G1 9.7e-23 105 35 6 208 1 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4G0 9.7e-23 105 35 6 208 3 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P33950 1.04e-20 99 25 18 482 1 hbpA Heme-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P23847 2e-20 98 24 17 488 1 dppA Dipeptide-binding protein Escherichia coli (strain K12)
P35592 1.39e-18 92 25 10 320 3 aliA Oligopeptide-binding protein AliA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q9HVS1 3.69e-18 91 23 19 520 1 PA4500 Dipeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGN2 1.77e-17 89 23 20 522 1 dppA3 Di/tripeptide-binding protein 3 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGV2 2.16e-16 85 20 21 548 1 dppA1 Di/tripeptide-binding protein 1 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q8FUX2 5.77e-16 84 22 19 537 3 BRA1090 Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 Brucella suis biovar 1 (strain 1330)
Q2YJK2 6.14e-16 84 22 19 537 3 BAB2_1049 Putative peptide-binding periplasmic protein BAB2_1049 Brucella abortus (strain 2308)
Q8VQK3 6.14e-16 84 22 19 537 3 BruAb2_1030 Putative peptide-binding periplasmic protein BruAb2_1030 Brucella abortus biovar 1 (strain 9-941)
Q8YDG6 1.5e-15 83 22 19 537 3 BMEII0210 Putative peptide-binding periplasmic protein BMEII0210 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
A0A0H2ZI72 1.57e-15 82 22 16 492 1 dppA5 Probable di/tripeptide-binding protein 5 Pseudomonas aeruginosa (strain UCBPP-PA14)
P36634 1.74e-15 82 21 19 552 2 sapA Peptide transport periplasmic protein SapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P18791 4.28e-14 79 31 7 189 1 amiA Oligopeptide-binding protein AmiA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q47622 2.67e-13 75 21 16 487 3 sapA Probable ABC transporter periplasmic-binding protein SapA Escherichia coli (strain K12)
Q2FVE7 6.7e-11 68 22 19 492 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain NCTC 8325 / PS 47)
P66772 1.16e-10 67 20 15 462 3 BQ2027_MB1311C Uncharacterized protein Mb1311c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WGU5 1.16e-10 67 20 15 462 1 Rv1280c Uncharacterized protein Rv1280c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGU4 1.16e-10 67 20 15 462 3 MT1317 Uncharacterized protein MT1317 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A9CIN5 2.33e-10 67 24 25 549 3 yepA Peptidoglycan-binding protein YepA Agrobacterium fabrum (strain C58 / ATCC 33970)
Q8FWN7 5.05e-10 65 24 17 443 3 BRA0409 Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 Brucella suis biovar 1 (strain 1330)
Q2YK66 5.05e-10 65 24 17 443 3 BAB2_0812 Putative ABC transporter peptide-binding protein BAB2_0812 Brucella abortus (strain 2308)
Q577J8 5.05e-10 65 24 17 443 3 BruAb2_0792 Putative ABC transporter peptide-binding protein BruAb2_0792 Brucella abortus biovar 1 (strain 9-941)
A5VU91 5.05e-10 65 24 17 443 3 BOV_A0352 Putative ABC transporter peptide-binding protein BOV_A0352 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
A0A0H3JTL0 5.23e-10 65 22 19 492 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q8YBP0 5.81e-10 65 24 17 443 3 BMEII0859 Putative ABC transporter peptide-binding protein BMEII0859 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FW84 7.18e-09 62 28 12 250 3 BRA0576 Putative binding protein BRA0576/BS1330_II0571 Brucella suis biovar 1 (strain 1330)
Q8YC41 8.03e-09 62 28 12 250 3 BMEII0691 Putative binding protein BMEII0691 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YKJ5 8.69e-09 62 28 12 250 3 BAB2_0664 Putative binding protein BAB2_0664 Brucella abortus (strain 2308)
Q577X5 8.69e-09 62 28 12 250 3 BruAb2_0648 Putative binding protein BruAb2_0648 Brucella abortus biovar 1 (strain 9-941)
A9CKL4 1.65e-08 60 22 18 493 3 yejA Probable peptide-binding protein YejA Agrobacterium fabrum (strain C58 / ATCC 33970)
P42061 8.01e-08 58 20 16 542 1 appA Oligopeptide-binding protein AppA Bacillus subtilis (strain 168)
P55669 2.26e-07 57 22 19 426 3 NGR_a01440 Probable peptide ABC transporter periplasmic-binding protein y4tO Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q9CEK0 2.42e-07 57 24 24 497 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis (strain IL1403)
P45285 2.92e-07 57 22 10 347 3 sapA Peptide transport periplasmic protein SapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O07570 8.89e-07 55 21 21 480 3 yhjP Uncharacterized protein YhjP Bacillus subtilis (strain 168)
Q07741 1.02e-06 55 25 18 390 1 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis
Q9RU24 1.24e-06 55 23 19 386 1 DR_1571 Probable ABC transporter-binding protein DR_1571 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P9WGU7 3.46e-06 53 24 10 239 1 lpqW Probable monoacyl phosphatidylinositol tetramannoside-binding protein LpqW Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGU6 3.46e-06 53 24 10 239 3 lpqW Probable monoacyl phosphatidylinositol tetramannoside-binding protein LpqW Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A0R2I8 3.56e-06 53 24 10 240 1 MSMEG_5130 Probable monoacyl phosphatidylinositol tetramannoside-binding protein LpqW Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
Q02VA9 1.71e-05 51 23 25 515 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. cremoris (strain SK11)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_12630
Feature type CDS
Gene oppA
Product ABC-type oligopeptide transport system, periplasmic component
Location 114390 - 116021 (strand: 1)
Length 1632 (nucleotides) / 543 (amino acids)

Contig

Accession ZDB_527
Length 181446 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_9
Orthogroup size 21
N. genomes 7

Actions

Genomic region

Domains

PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4166 Amino acid transport and metabolism (E) E ABC-type oligopeptide transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15580 oligopeptide transport system substrate-binding protein beta-Lactam resistance
ABC transporters
Quorum sensing		 -

Protein Sequence

MKKHTIAVSLTQALLLSALSYSAWAAQVPPGTKLAEKQVIVINNGTEPVSLDPHKVEGVPESNIILNLLEGLVSTDGDGHIVPGVAESWSSPDNRIWTFTLRPDAKWSDGSPVTAQDFVYSWRRLTDPKTASPYGSYLHYAYVENVDDIISGKKPPESLGVKAVDDRTFQVQLTQPVPYFPDMLSHTALKPVPKGAIEQFGDKWTSAGKFTGNGAYTLSAWNVNERLVLKRNPKYWNDKDTVIEQATFLPLQSETSDINRYRAGEIDVTNSSVPPVLFAKMKKDIPAQVQISPYLCTFYYEINNTAAPFTDPKVREAVKLGLDRDIITHKIMGQGQIPAYGFTPHYIKGGHFTTPEWASLTQEQRNEKGRKLLEEAGYSEKNPLTFELLYNTSDQNKQQAIAAASMWQKNIGAKVVLKNQEWKTSNQNRHEGNYQVARATWCADYNEPSSFLNIFLSDSSNNTSFYRNIAFDSAMQRALLATDEKTRQSAYQEAETQLDQDSALIPVYYRVSVRLIKPSVGGITGNDPLDYMDIKRLYMVETH

Flanking regions ( +/- flanking 50bp)

TTTTTAATCACGTTGTTCATTTAACAGGTGTTATTCAGAAGGGACGGAAGATGAAAAAACACACTATTGCTGTTTCCCTCACGCAGGCGCTGCTGCTGAGTGCACTCTCTTATTCCGCATGGGCGGCACAGGTTCCGCCGGGAACAAAGCTGGCGGAAAAACAGGTTATTGTTATCAATAACGGCACTGAACCGGTATCACTCGATCCGCATAAAGTGGAAGGGGTGCCGGAATCCAACATTATTCTTAATCTGCTGGAAGGGCTGGTTTCCACTGACGGTGACGGCCATATCGTGCCCGGGGTGGCAGAGAGCTGGTCGTCCCCGGATAACCGCATCTGGACATTCACGCTGCGGCCGGACGCAAAGTGGAGTGACGGCTCGCCGGTGACCGCACAGGATTTTGTCTACAGCTGGCGGCGGCTGACTGACCCGAAAACCGCATCACCTTACGGCAGCTACCTGCATTATGCTTATGTAGAGAATGTGGATGATATTATCAGCGGTAAAAAACCACCGGAAAGTCTCGGCGTCAAAGCGGTTGATGACAGAACCTTTCAGGTTCAGCTGACTCAGCCGGTGCCGTATTTCCCGGATATGCTGAGCCATACCGCACTGAAGCCGGTACCGAAAGGGGCGATTGAACAATTTGGTGATAAATGGACATCCGCCGGAAAATTTACCGGTAACGGCGCATATACCCTGTCTGCCTGGAATGTGAATGAACGGCTGGTGCTTAAACGCAACCCGAAATACTGGAATGATAAAGATACCGTGATTGAACAGGCGACATTCCTGCCGCTCCAGTCAGAAACCAGTGATATTAACCGCTATCGCGCCGGTGAAATAGATGTCACCAACAGTTCGGTGCCGCCGGTTCTGTTCGCCAAAATGAAAAAAGATATTCCGGCGCAGGTTCAGATTTCCCCGTATTTATGCACATTCTATTATGAAATAAATAATACCGCGGCACCGTTTACCGACCCGAAAGTACGCGAAGCCGTTAAACTGGGGCTGGATCGCGATATTATCACCCATAAAATTATGGGGCAGGGACAAATTCCCGCTTACGGTTTCACCCCGCATTATATTAAAGGCGGGCATTTCACCACGCCGGAATGGGCATCCCTGACACAGGAACAGCGCAATGAAAAAGGGCGCAAACTGCTGGAAGAAGCCGGTTACAGCGAAAAAAATCCGCTGACCTTTGAATTGCTCTATAACACGTCCGATCAGAATAAACAGCAGGCAATTGCCGCCGCCTCCATGTGGCAGAAAAATATCGGCGCGAAAGTGGTGCTGAAAAACCAGGAATGGAAAACCTCCAATCAGAACCGCCATGAAGGAAATTATCAGGTGGCCCGGGCGACCTGGTGCGCGGATTACAATGAGCCGTCCTCGTTTCTGAACATTTTTCTGTCAGACAGCAGTAATAACACCAGTTTCTACCGGAATATTGCATTTGACAGTGCAATGCAGCGCGCTTTGCTGGCAACGGATGAAAAAACACGTCAATCCGCTTACCAGGAAGCAGAAACTCAGTTAGATCAGGACTCTGCATTAATTCCTGTTTATTATCGCGTGAGTGTCCGGCTGATAAAACCATCAGTCGGCGGAATTACCGGCAATGACCCGCTTGATTATATGGATATTAAGCGCTTATATATGGTAGAAACACATTAATAATAAAAAATTTGCACTCACAGAGTGCGAAAAAAATGAAGGTGCGGAAG