Homologs in group_9

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20 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05300 FBDBKF_05300 57.6 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
FBDBKF_05570 FBDBKF_05570 45.0 Morganella morganii S1 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12020 EHELCC_12020 45.0 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12290 EHELCC_12290 57.6 Morganella morganii S2 oppA ABC-type oligopeptide transport system, periplasmic component
EHELCC_12295 EHELCC_12295 100.0 Morganella morganii S2 oppA oligopeptide ABC transporter substrate-binding protein OppA
NLDBIP_12360 NLDBIP_12360 45.0 Morganella morganii S4 oppA ABC-type oligopeptide transport system, periplasmic component
NLDBIP_12630 NLDBIP_12630 57.6 Morganella morganii S4 oppA ABC-type oligopeptide transport system, periplasmic component
NLDBIP_12635 NLDBIP_12635 100.0 Morganella morganii S4 oppA oligopeptide ABC transporter substrate-binding protein OppA
LHKJJB_12220 LHKJJB_12220 45.0 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12490 LHKJJB_12490 57.6 Morganella morganii S3 oppA ABC-type oligopeptide transport system, periplasmic component
LHKJJB_12495 LHKJJB_12495 100.0 Morganella morganii S3 oppA oligopeptide ABC transporter substrate-binding protein OppA
HKOGLL_10835 HKOGLL_10835 45.0 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11105 HKOGLL_11105 57.6 Morganella morganii S5 oppA ABC-type oligopeptide transport system, periplasmic component
HKOGLL_11110 HKOGLL_11110 100.0 Morganella morganii S5 oppA oligopeptide ABC transporter substrate-binding protein OppA
F4V73_RS03735 F4V73_RS03735 45.8 Morganella psychrotolerans - peptide ABC transporter substrate-binding protein
F4V73_RS05750 F4V73_RS05750 89.4 Morganella psychrotolerans oppA oligopeptide ABC transporter substrate-binding protein OppA
F4V73_RS05755 F4V73_RS05755 56.6 Morganella psychrotolerans - ABC transporter substrate-binding protein
PMI_RS06600 PMI_RS06600 43.6 Proteus mirabilis HI4320 - peptide ABC transporter substrate-binding protein
PMI_RS07140 PMI_RS07140 77.8 Proteus mirabilis HI4320 oppA oligopeptide ABC transporter substrate-binding protein OppA
PMI_RS07145 PMI_RS07145 55.7 Proteus mirabilis HI4320 - ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_9

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_9

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06202 0.0 806 70 2 547 1 oppA Periplasmic oligopeptide-binding protein OppA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P23843 0.0 798 68 2 547 1 oppA Periplasmic oligopeptide-binding protein OppA Escherichia coli (strain K12)
P71370 0.0 567 52 6 534 3 oppA Periplasmic oligopeptide-binding protein OppA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P77348 1.39e-166 486 44 5 547 1 mppA Periplasmic murein peptide-binding protein MppA Escherichia coli (strain K12)
Q46863 3.63e-147 436 42 5 542 1 ygiS Probable deoxycholate-binding periplasmic protein YgiS Escherichia coli (strain K12)
P24141 1.3e-87 283 34 13 520 1 oppA Oligopeptide-binding protein OppA Bacillus subtilis (strain 168)
P26906 8.29e-70 236 32 14 531 1 dppE Dipeptide-binding protein DppE Bacillus subtilis (strain 168)
P44572 6.25e-64 220 28 7 474 3 HI_0213 Putative binding protein HI_0213 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A2RI74 3.06e-43 165 29 21 540 1 dppA Dipeptide-binding protein Lactococcus lactis subsp. cremoris (strain MG1363)
P76128 1.54e-31 131 26 14 502 2 ddpA Probable D,D-dipeptide-binding periplasmic protein DdpA Escherichia coli (strain K12)
A0A0H2ZGV7 2.27e-29 125 24 13 469 1 dppA4 Di/tripeptide-binding protein 4 Pseudomonas aeruginosa (strain UCBPP-PA14)
P33950 1.82e-26 116 25 14 469 1 hbpA Heme-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P75797 1.97e-25 113 23 14 538 1 gsiB Glutathione-binding protein GsiB Escherichia coli (strain K12)
Q32IB6 4.09e-25 112 23 14 538 3 gsiB Glutathione-binding protein GsiB Shigella dysenteriae serotype 1 (strain Sd197)
Q8X6V9 7.72e-25 111 23 14 538 3 gsiB Glutathione-binding protein GsiB Escherichia coli O157:H7
P33590 1.25e-24 110 25 21 477 1 nikA Nickel-binding periplasmic protein Escherichia coli (strain K12)
Q3Z3V3 1.26e-24 110 23 14 538 3 gsiB Glutathione-binding protein GsiB Shigella sonnei (strain Ss046)
Q323W4 3.04e-24 109 22 14 538 3 gsiB Glutathione-binding protein GsiB Shigella boydii serotype 4 (strain Sb227)
Q1RE95 3.86e-24 109 22 14 538 3 gsiB Glutathione-binding protein GsiB Escherichia coli (strain UTI89 / UPEC)
Q8CW88 3.86e-24 109 22 14 538 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A968 3.86e-24 109 22 14 538 3 gsiB Glutathione-binding protein GsiB Escherichia coli O1:K1 / APEC
Q821B3 4.08e-24 109 22 14 538 3 gsiB Glutathione-binding protein GsiB Shigella flexneri
Q0TJL8 1.5e-23 107 22 14 538 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q0T6D2 2.62e-23 107 22 15 539 3 gsiB Glutathione-binding protein GsiB Shigella flexneri serotype 5b (strain 8401)
P23847 6.95e-23 105 22 21 554 1 dppA Dipeptide-binding protein Escherichia coli (strain K12)
Q9HVS4 1.44e-22 104 22 13 468 1 PA4497 Tripeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9HVS1 1.9e-22 104 22 13 476 1 PA4500 Dipeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGN2 3.99e-22 103 22 13 462 1 dppA3 Di/tripeptide-binding protein 3 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGW2 4.89e-22 103 22 13 468 1 dppA2 Di/tripeptide-binding protein 2 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGV2 1.65e-21 101 22 15 512 1 dppA1 Di/tripeptide-binding protein 1 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q8Z863 1.5e-20 98 22 16 530 3 gsiB Glutathione-binding protein GsiB Salmonella typhi
Q8ZQM3 1.77e-20 98 22 16 530 3 gsiB Glutathione-binding protein GsiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A4G1 2.17e-20 98 33 8 213 1 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4G0 2.17e-20 98 33 8 213 3 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q57RB1 2.34e-20 97 24 9 372 3 gsiB Glutathione-binding protein GsiB Salmonella choleraesuis (strain SC-B67)
Q5PGP4 3.35e-20 97 22 16 531 3 gsiB Glutathione-binding protein GsiB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P31306 4.13e-19 94 23 22 549 1 sarA Oligopeptide-binding protein SarA Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
P35592 4.09e-18 91 30 6 213 3 aliA Oligopeptide-binding protein AliA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q6D3B0 7.26e-18 90 22 16 554 3 gsiB Glutathione-binding protein GsiB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A0A0H2ZI72 3.13e-17 88 19 16 503 1 dppA5 Probable di/tripeptide-binding protein 5 Pseudomonas aeruginosa (strain UCBPP-PA14)
P36634 9.83e-15 80 22 19 550 2 sapA Peptide transport periplasmic protein SapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P06109 1.02e-14 80 24 26 497 3 xp55 Protein XP55 Streptomyces lividans
Q47622 2.82e-14 79 23 14 454 3 sapA Probable ABC transporter periplasmic-binding protein SapA Escherichia coli (strain K12)
P18791 1.18e-13 77 26 5 213 1 amiA Oligopeptide-binding protein AmiA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q9CEK0 3.64e-12 72 23 22 480 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis (strain IL1403)
Q2YJK2 2.62e-11 69 22 17 424 3 BAB2_1049 Putative peptide-binding periplasmic protein BAB2_1049 Brucella abortus (strain 2308)
Q8VQK3 2.62e-11 69 22 17 424 3 BruAb2_1030 Putative peptide-binding periplasmic protein BruAb2_1030 Brucella abortus biovar 1 (strain 9-941)
Q8YDG6 2.76e-11 69 22 17 424 3 BMEII0210 Putative peptide-binding periplasmic protein BMEII0210 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q02VA9 3.61e-11 69 22 25 599 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. cremoris (strain SK11)
Q07741 7.01e-11 68 22 25 599 1 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis
P45285 8.9e-10 65 22 8 319 3 sapA Peptide transport periplasmic protein SapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55691 2.35e-08 60 21 19 487 3 NGR_a00920 Uncharacterized protein y4wM Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q8FWN7 7.76e-08 58 25 13 308 3 BRA0409 Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 Brucella suis biovar 1 (strain 1330)
Q2YK66 7.76e-08 58 25 13 308 3 BAB2_0812 Putative ABC transporter peptide-binding protein BAB2_0812 Brucella abortus (strain 2308)
Q577J8 7.76e-08 58 25 13 308 3 BruAb2_0792 Putative ABC transporter peptide-binding protein BruAb2_0792 Brucella abortus biovar 1 (strain 9-941)
A5VU91 7.76e-08 58 25 13 308 3 BOV_A0352 Putative ABC transporter peptide-binding protein BOV_A0352 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8YBP0 8.61e-08 58 25 13 308 3 BMEII0859 Putative ABC transporter peptide-binding protein BMEII0859 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P42061 5.75e-07 55 23 13 322 1 appA Oligopeptide-binding protein AppA Bacillus subtilis (strain 168)
Q2FVE7 7.83e-07 55 20 19 502 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain NCTC 8325 / PS 47)
A0A0H3JTL0 4.76e-06 53 20 19 502 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain Mu50 / ATCC 700699)
A9CIN5 5.91e-06 52 25 15 298 3 yepA Peptidoglycan-binding protein YepA Agrobacterium fabrum (strain C58 / ATCC 33970)
Q9X4Y1 2.79e-05 50 23 13 338 2 agpA Periplasmic alpha-galactoside-binding protein Rhizobium meliloti (strain 1021)
Q2YKJ5 6.65e-05 49 22 9 239 3 BAB2_0664 Putative binding protein BAB2_0664 Brucella abortus (strain 2308)
Q577X5 6.65e-05 49 22 9 239 3 BruAb2_0648 Putative binding protein BruAb2_0648 Brucella abortus biovar 1 (strain 9-941)
Q8FW84 6.88e-05 49 22 9 239 3 BRA0576 Putative binding protein BRA0576/BS1330_II0571 Brucella suis biovar 1 (strain 1330)
Q8YC41 6.93e-05 49 22 9 239 3 BMEII0691 Putative binding protein BMEII0691 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q9RU24 8.86e-05 48 21 13 327 1 DR_1571 Probable ABC transporter-binding protein DR_1571 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P66772 0.000239 47 19 15 409 3 BQ2027_MB1311C Uncharacterized protein Mb1311c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WGU5 0.000239 47 19 15 409 1 Rv1280c Uncharacterized protein Rv1280c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGU4 0.000239 47 19 15 409 3 MT1317 Uncharacterized protein MT1317 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q2G2P5 0.000515 46 27 9 221 1 nikA Nickel-binding protein NikA Staphylococcus aureus (strain NCTC 8325 / PS 47)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_05295
Feature type CDS
Gene oppA
Product oligopeptide ABC transporter substrate-binding protein OppA
Location 63660 - 65306 (strand: -1)
Length 1647 (nucleotides) / 548 (amino acids)

Contig

Accession contig_5
Length 181448 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_9
Orthogroup size 21
N. genomes 7

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Genomic region

Domains

PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4166 Amino acid transport and metabolism (E) E ABC-type oligopeptide transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15580 oligopeptide transport system substrate-binding protein beta-Lactam resistance
ABC transporters
Quorum sensing		 -

Protein Sequence

MVNSTKKTLLALSVVAAMGMGMGIGTQAFAADVPAGVQLADKQDLIRNNGSEPQSLDPHKVEGVPEANIIRDLMEGITLEGPSGEILPGSAISWENKDFKVWTFKIREDAKWSNGDPVTAQDFVYSWRRLADPNTASPYASYLQYAHVVNIDDVIAGKKKPEELGIKALDDKTLELTLSEEVPYIPKLLAHNSMSPVHPATVEKFGDKWTQPGNYVSNGAYTLKDWVVNEKIELTRNPKYWDNEKTVINNVRFLPISSEVTDVNRYRSGEIDMTYNNLPIELFQKLKKEIPDELRISPYMCTYYYEINNEKAPFDNPKVREALKLSLDRDIMVNKVKAQGDTPAFGFTPPFADGMSAKEPEWFANMTQEQRNEKARKLLEEAGFTKDKPLKFNLLYNTSDLHKKMAIAASSIWKKNLGAEVQLVNQEWKTFLDTRHQGTYDVARAAWCADYNEPSSFLNMVLSYSSTNTPHYKSAEFDKLMKQSLQVKTDAERAQIYQQAEAQLDKDSAIVPVYYYVSTRLVKPYVGGYTGKDPLDHFHTKNLYMIKK

Flanking regions ( +/- flanking 50bp)

AAAAACGCAACAAACGCAAAACACATTCGTCAATGGGGAGTTTATGTAAGATGGTTAATTCAACGAAAAAAACACTGCTGGCACTCAGTGTGGTAGCAGCAATGGGGATGGGGATGGGGATTGGTACACAGGCGTTTGCTGCGGATGTACCGGCCGGTGTTCAGCTGGCAGATAAGCAGGATTTAATCCGCAATAATGGCTCTGAGCCGCAGTCACTGGATCCGCATAAAGTGGAAGGGGTACCGGAAGCGAATATTATCCGCGACCTGATGGAAGGTATTACCCTGGAAGGGCCAAGTGGTGAAATTCTGCCGGGCTCGGCAATCTCCTGGGAAAATAAAGATTTTAAAGTCTGGACGTTTAAAATCCGCGAAGATGCAAAATGGTCCAACGGCGACCCGGTGACCGCACAGGACTTCGTTTACAGCTGGCGCCGCCTGGCTGATCCGAATACCGCATCACCGTATGCCAGTTATCTCCAGTATGCTCACGTGGTAAATATTGATGATGTTATCGCCGGGAAGAAAAAGCCGGAAGAGCTGGGCATCAAAGCGCTGGATGATAAAACCCTTGAACTGACCCTCTCTGAAGAGGTGCCGTATATTCCGAAACTGCTGGCGCATAACTCCATGTCTCCGGTGCATCCGGCCACTGTCGAGAAATTCGGTGATAAGTGGACTCAGCCGGGCAATTATGTCAGCAACGGCGCATACACCCTGAAAGACTGGGTGGTTAACGAAAAAATTGAACTGACCCGCAACCCGAAATACTGGGATAACGAAAAAACCGTTATCAATAATGTCCGTTTCCTGCCGATTTCCTCTGAAGTTACTGATGTTAACCGCTACCGCAGCGGCGAAATCGACATGACCTATAACAACCTGCCGATTGAACTGTTCCAGAAACTGAAAAAAGAAATTCCGGACGAACTGCGCATTTCGCCGTATATGTGTACCTATTACTACGAAATCAATAACGAAAAAGCGCCGTTTGATAACCCGAAAGTCCGTGAAGCCCTGAAACTGAGCCTTGACCGCGACATTATGGTCAACAAAGTCAAAGCACAGGGTGATACCCCGGCATTTGGTTTCACACCACCGTTTGCGGATGGTATGTCAGCCAAAGAGCCTGAGTGGTTCGCCAATATGACGCAGGAGCAGCGTAACGAAAAAGCGCGCAAACTGCTGGAAGAAGCCGGGTTTACCAAAGATAAACCACTGAAATTTAACCTGCTGTATAACACATCTGATCTGCACAAGAAAATGGCGATCGCCGCATCGTCTATCTGGAAGAAAAACCTCGGCGCGGAAGTTCAGCTGGTTAACCAGGAATGGAAAACCTTCCTCGATACCCGCCATCAGGGGACTTATGATGTTGCCCGCGCCGCATGGTGTGCGGATTATAACGAACCGTCTTCATTCCTGAACATGGTTCTCTCTTACAGCAGCACCAACACCCCGCATTATAAGAGTGCGGAGTTTGATAAGCTGATGAAACAATCCCTTCAGGTGAAAACCGATGCGGAACGTGCGCAGATCTATCAGCAGGCGGAAGCTCAGCTGGATAAAGACTCTGCCATCGTGCCGGTCTATTACTATGTCAGTACCCGTTTAGTGAAACCGTATGTAGGTGGCTATACCGGAAAAGATCCGCTGGATCACTTCCACACCAAAAACTTATATATGATTAAAAAATAATACCGACGGTTGGCCGCCCTGCGAAGGGCGGCCTGTGTAGTGTGTACCCC