COG1737


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1737, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 29 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains
Function(s) descr. Transcription (K)

Occurence in the database

COG1737 is associated with 29 different proteins (see tab "Protein list" and "Profile")
The 29 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_642 FBDBKF_02105 109969 110817 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
1 group_804 FBDBKF_03795 163144 163884 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
2 group_197 FBDBKF_11805 12398 13258 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
3 group_2941 FBDBKF_14940 1255 2142 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S1
4 group_642 EHELCC_02575 497789 498637 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
5 group_804 EHELCC_06740 83219 83959 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
6 group_2941 EHELCC_11305 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
7 group_197 EHELCC_14500 121447 122307 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S2
8 group_642 NLDBIP_00885 181499 182347 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
9 group_804 NLDBIP_07065 83092 83832 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
10 group_2941 NLDBIP_11650 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
11 group_197 NLDBIP_15595 125384 126244 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S4
12 group_642 LHKJJB_01150 210338 211186 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
13 group_804 LHKJJB_06600 46838 47578 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
14 group_2941 LHKJJB_11510 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
15 group_197 LHKJJB_15015 12398 13258 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S3
16 group_642 HKOGLL_01190 215849 216697 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
17 group_804 HKOGLL_04330 185809 186549 -1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
18 group_2941 HKOGLL_10120 82764 83651 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
19 group_197 HKOGLL_19270 93 953 1 rpiR DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains Morganella morganii S5
20 group_642 F4V73_RS04470 946159 947007 -1 MurR/RpiR family transcriptional regulator Morganella psychrotolerans
21 group_804 F4V73_RS11075 352680 353420 1 MurR/RpiR family transcriptional regulator Morganella psychrotolerans
22 group_197 F4V73_RS14850 204955 205815 1 SIS domain-containing protein Morganella psychrotolerans
23 group_642 PMI_RS05580 1217377 1218219 -1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
24 group_197 PMI_RS10455 2296223 2297047 1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
25 group_197 PMI_RS13900 3088577 3089437 -1 SIS domain-containing protein Proteus mirabilis HI4320
26 group_2941 PMI_RS14705 3260727 3261614 -1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
27 group_804 PMI_RS14750 3273031 3273771 -1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320
28 group_197 PMI_RS17480 3836649 3837500 1 MurR/RpiR family transcriptional regulator Proteus mirabilis HI4320