Orthogroup:group_43


Homologs in group_43

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04605 FBDBKF_04605 Morganella morganii S1 emrA Multidrug resistance efflux pump EmrA
FBDBKF_10185 FBDBKF_10185 Morganella morganii S1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
EHELCC_04985 EHELCC_04985 Morganella morganii S2 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
EHELCC_05895 EHELCC_05895 Morganella morganii S2 emrA Multidrug resistance efflux pump EmrA
NLDBIP_04985 NLDBIP_04985 Morganella morganii S4 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
NLDBIP_06215 NLDBIP_06215 Morganella morganii S4 emrA Multidrug resistance efflux pump EmrA
LHKJJB_03095 LHKJJB_03095 Morganella morganii S3 emrA Multidrug resistance efflux pump EmrA
LHKJJB_13645 LHKJJB_13645 Morganella morganii S3 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
HKOGLL_06570 HKOGLL_06570 Morganella morganii S5 emrA Multidrug resistance efflux pump EmrA
HKOGLL_12890 HKOGLL_12890 Morganella morganii S5 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
F4V73_RS00155 F4V73_RS00155 Morganella psychrotolerans emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
F4V73_RS09055 F4V73_RS09055 Morganella psychrotolerans - EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit
PMI_RS01985 PMI_RS01985 Proteus mirabilis HI4320 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
PMI_RS15260 PMI_RS15260 Proteus mirabilis HI4320 - HlyD family secretion protein

Distribution of group_43 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_43 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_43

Orthogroup content: 14 members

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This page summarizes the annotation of all members of the orthologous group group_43.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 emrA 12
2 - 2

Product

# Product Occurence
1 Multidrug resistance efflux pump EmrA 5
2 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA 7
3 EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit 1
4 HlyD family secretion protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1566 14 V Defense mechanisms (V) Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03543 13 membrane fusion protein, multidrug efflux system - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00529 14 Cation efflux system protein CusB domain 1
PF16576 14 Barrel-sandwich domain of CusB or HlyD membrane-fusion

Annotations of the 159 SwissProt hits

Annotation Number of occurrences
36 kDa antigen 1
Cation efflux system protein CzcB 1
Cobalt-zinc-cadmium resistance protein CzcB 1
Colistin resistance protein EmrA 1
Fatty acid resistance protein FarA 1
Fusaric acid resistance protein FusE 1
Inner membrane protein YiaV 1
Inner membrane protein YibH 2
Multidrug export protein EmrA 2
Multidrug resistance protein MdtA 21
Multidrug resistance protein MdtN 4
Nickel and cobalt resistance protein CnrB 1
Nickel-cobalt-cadmium resistance protein NccB 1
Nodulation protein NolF 1
Probable multidrug resistance protein EmrK 1
Putative efflux system component YhbJ 1
Putative multidrug resistance protein MdtA 1
Pyoverdine export membrane fusion protein PvdR 1
UPF0194 membrane protein CKO_02332 1
UPF0194 membrane protein Ent638_1286 1
UPF0194 membrane protein RB0873 1
UPF0194 membrane protein YE2891 1
UPF0194 membrane protein YPA_1093 1
UPF0194 membrane protein YPK_2900 1
UPF0194 membrane protein YPN_2816 1
UPF0194 membrane protein YPTB1212 1
UPF0194 membrane protein YPTS_1292 1
UPF0194 membrane protein YP_0975 1
UPF0194 membrane protein YbhG 42
UPF0194 membrane protein YpsIP31758_2812 1
UPF0194 membrane protein in asrC 5'region (Fragment) 1
Uncharacterized protein HI_0894 1
Uncharacterized protein YdhJ 1
Uncharacterized protein YhiI 1
p-hydroxybenzoic acid efflux pump subunit AaeA 59

Protein length

Min length 366
Max length 396
Mean length (sd) 391.8 (7.7)
Median length 392.0

Protein length distribution