Orthogroup:group_410


Homologs in group_410

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17715 FBDBKF_17715 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
EHELCC_09740 EHELCC_09740 Morganella morganii S2 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_10120 NLDBIP_10120 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_07635 LHKJJB_07635 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes
HKOGLL_07185 HKOGLL_07185 Morganella morganii S5 tonB Periplasmic protein TonB, links inner and outer membranes
F4V73_RS15245 F4V73_RS15245 Morganella psychrotolerans - TonB family protein
PMI_RS07545 PMI_RS07545 Proteus mirabilis HI4320 - TonB family protein
PMI_RS18455 PMI_RS18455 Proteus mirabilis HI4320 - energy transducer TonB

Distribution of group_410 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_410 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_410

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_410.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tonB 5
2 - 3

Product

# Product Occurence
1 Periplasmic protein TonB, links inner and outer membranes 5
2 TonB family protein 2
3 energy transducer TonB 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0810 8 M Cell wall/membrane/envelope biogenesis (M) Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03832 8 periplasmic protein TonB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03544 8 Gram-negative bacterial TonB protein C-terminal

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Protein TonB 3

Protein length

Min length 240
Max length 284
Mean length (sd) 259.6 (12.0)
Median length 258.0

Protein length distribution