COG1180


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1180, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 17 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Pyruvate-formate lyase-activating enzyme
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG1180 is associated with 17 different proteins (see tab "Protein list" and "Profile")
The 17 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_152 FBDBKF_07125 94259 94999 -1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S1
1 group_1422 FBDBKF_08780 135628 136095 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S1
2 group_152 EHELCC_03845 91187 91927 1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S2
3 group_1422 EHELCC_12745 27630 28097 1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S2
4 group_152 EHELCC_19995 11 115 1 hypothetical protein Morganella morganii S2
5 group_152 NLDBIP_03845 90983 91723 1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S4
6 group_1422 NLDBIP_13085 27630 28097 1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S4
7 group_152 LHKJJB_09675 91097 91837 1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S3
8 group_1422 LHKJJB_13470 134346 134813 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S3
9 group_152 HKOGLL_09300 99215 99955 -1 pflA pyruvate formate lyase 1-activating protein Morganella morganii S5
10 group_1422 HKOGLL_11560 27630 28097 1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella morganii S5
11 group_152 F4V73_RS01310 281993 282733 -1 pflA pyruvate formate lyase 1-activating protein Morganella psychrotolerans
12 group_1422 F4V73_RS09995 103694 104161 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Morganella psychrotolerans
13 group_152 PMI_RS03465 769220 769960 -1 pflA pyruvate formate lyase 1-activating protein Proteus mirabilis HI4320
14 group_152 PMI_RS12405 2750872 2751738 1 YjjW family glycine radical enzyme activase Proteus mirabilis HI4320
15 group_152 PMI_RS13380 2964242 2965192 -1 cutD choline TMA-lyase-activating enzyme Proteus mirabilis HI4320
16 group_1422 PMI_RS17195 3777838 3778302 -1 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein Proteus mirabilis HI4320