COG0814
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0814, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 64 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Amino acid permease |
---|---|
Function(s) descr. | Amino acid transport and metabolism (E) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_438 | FBDBKF_00415 | 62032 | 63237 | 1 | tyrP | tyrosine transporter TyrP | Morganella morganii S1 |
1 | group_15 | FBDBKF_02695 | 234303 | 235589 | 1 | sdaC | Amino acid permease | Morganella morganii S1 |
2 | group_18 | FBDBKF_06965 | 57204 | 58523 | -1 | sdaC | Amino acid permease | Morganella morganii S1 |
3 | group_18 | FBDBKF_06970 | 59476 | 60795 | -1 | sdaC | Amino acid permease | Morganella morganii S1 |
4 | group_19 | FBDBKF_07880 | 104662 | 105906 | 1 | mtr | tryptophan permease | Morganella morganii S1 |
5 | group_15 | FBDBKF_08400 | 56313 | 57614 | -1 | sdaC | Amino acid permease | Morganella morganii S1 |
6 | group_15 | FBDBKF_10620 | 85877 | 87160 | -1 | sdaC | Amino acid permease | Morganella morganii S1 |
7 | group_19 | FBDBKF_11130 | 50714 | 51982 | -1 | sdaC | Amino acid permease | Morganella morganii S1 |
8 | group_19 | FBDBKF_14845 | 70429 | 71676 | 1 | mtr | tryptophan permease | Morganella morganii S1 |
9 | group_18 | FBDBKF_15750 | 1481 | 2809 | 1 | tdcC | threonine/serine transporter TdcC | Morganella morganii S1 |
10 | group_438 | EHELCC_01130 | 245631 | 246836 | -1 | tyrP | tyrosine transporter TyrP | Morganella morganii S2 |
11 | group_15 | EHELCC_03165 | 622123 | 623409 | 1 | sdaC | Amino acid permease | Morganella morganii S2 |
12 | group_18 | EHELCC_04000 | 125391 | 126710 | 1 | sdaC | Amino acid permease | Morganella morganii S2 |
13 | group_18 | EHELCC_04005 | 127663 | 128982 | 1 | sdaC | Amino acid permease | Morganella morganii S2 |
14 | group_19 | EHELCC_05095 | 7486 | 8754 | 1 | sdaC | Amino acid permease | Morganella morganii S2 |
15 | group_15 | EHELCC_13125 | 106111 | 107412 | 1 | sdaC | Amino acid permease | Morganella morganii S2 |
16 | group_19 | EHELCC_13710 | 78856 | 80100 | 1 | mtr | tryptophan permease | Morganella morganii S2 |
17 | group_15 | EHELCC_14955 | 85867 | 87150 | -1 | sdaC | Amino acid permease | Morganella morganii S2 |
18 | group_19 | EHELCC_15650 | 100505 | 101752 | 1 | mtr | tryptophan permease | Morganella morganii S2 |
19 | group_18 | EHELCC_17665 | 35410 | 36738 | 1 | tdcC | threonine/serine transporter TdcC | Morganella morganii S2 |
20 | group_15 | NLDBIP_00295 | 56727 | 58013 | -1 | sdaC | Amino acid permease | Morganella morganii S4 |
21 | group_438 | NLDBIP_02330 | 433300 | 434505 | 1 | tyrP | tyrosine transporter TyrP | Morganella morganii S4 |
22 | group_18 | NLDBIP_04000 | 125187 | 126506 | 1 | sdaC | Amino acid permease | Morganella morganii S4 |
23 | group_18 | NLDBIP_04005 | 127459 | 128778 | 1 | sdaC | Amino acid permease | Morganella morganii S4 |
24 | group_19 | NLDBIP_05415 | 48559 | 49827 | 1 | sdaC | Amino acid permease | Morganella morganii S4 |
25 | group_15 | NLDBIP_13465 | 106111 | 107412 | 1 | sdaC | Amino acid permease | Morganella morganii S4 |
26 | group_19 | NLDBIP_14155 | 99731 | 100975 | 1 | mtr | tryptophan permease | Morganella morganii S4 |
27 | group_15 | NLDBIP_14785 | 85867 | 87150 | -1 | sdaC | Amino acid permease | Morganella morganii S4 |
28 | group_19 | NLDBIP_16180 | 100505 | 101752 | 1 | mtr | tryptophan permease | Morganella morganii S4 |
29 | group_18 | NLDBIP_19335 | 11355 | 12683 | 1 | tdcC | threonine/serine transporter TdcC | Morganella morganii S4 |
30 | group_15 | LHKJJB_01740 | 334672 | 335958 | 1 | sdaC | Amino acid permease | Morganella morganii S3 |
31 | group_19 | LHKJJB_02295 | 26083 | 27351 | 1 | sdaC | Amino acid permease | Morganella morganii S3 |
32 | group_438 | LHKJJB_03845 | 40541 | 41746 | 1 | tyrP | tyrosine transporter TyrP | Morganella morganii S3 |
33 | group_19 | LHKJJB_08695 | 58774 | 60018 | -1 | mtr | tryptophan permease | Morganella morganii S3 |
34 | group_18 | LHKJJB_09830 | 125301 | 126620 | 1 | sdaC | Amino acid permease | Morganella morganii S3 |
35 | group_18 | LHKJJB_09835 | 127573 | 128892 | 1 | sdaC | Amino acid permease | Morganella morganii S3 |
36 | group_15 | LHKJJB_13090 | 55031 | 56332 | -1 | sdaC | Amino acid permease | Morganella morganii S3 |
37 | group_15 | LHKJJB_14560 | 54576 | 55859 | 1 | sdaC | Amino acid permease | Morganella morganii S3 |
38 | group_19 | LHKJJB_15660 | 14934 | 16181 | -1 | mtr | tryptophan permease | Morganella morganii S3 |
39 | group_18 | LHKJJB_18105 | 35410 | 36738 | 1 | tdcC | threonine/serine transporter TdcC | Morganella morganii S3 |
40 | group_15 | HKOGLL_01780 | 340183 | 341469 | 1 | sdaC | Amino acid permease | Morganella morganii S5 |
41 | group_438 | HKOGLL_03200 | 245836 | 247041 | -1 | tyrP | tyrosine transporter TyrP | Morganella morganii S5 |
42 | group_19 | HKOGLL_08245 | 58774 | 60018 | -1 | mtr | tryptophan permease | Morganella morganii S5 |
43 | group_18 | HKOGLL_09140 | 62160 | 63479 | -1 | sdaC | Amino acid permease | Morganella morganii S5 |
44 | group_18 | HKOGLL_09145 | 64432 | 65751 | -1 | sdaC | Amino acid permease | Morganella morganii S5 |
45 | group_15 | HKOGLL_11940 | 106111 | 107412 | 1 | sdaC | Amino acid permease | Morganella morganii S5 |
46 | group_15 | HKOGLL_13180 | 54576 | 55859 | 1 | sdaC | Amino acid permease | Morganella morganii S5 |
47 | group_19 | HKOGLL_14780 | 14146 | 15393 | -1 | mtr | tryptophan permease | Morganella morganii S5 |
48 | group_19 | HKOGLL_15675 | 49523 | 50791 | 1 | sdaC | Amino acid permease | Morganella morganii S5 |
49 | group_18 | HKOGLL_18975 | 5316 | 6644 | -1 | tdcC | threonine/serine transporter TdcC | Morganella morganii S5 |
50 | group_18 | F4V73_RS01160 | 244299 | 245618 | -1 | HAAAP family serine/threonine permease | Morganella psychrotolerans | |
51 | group_18 | F4V73_RS01165 | 246705 | 248024 | -1 | HAAAP family serine/threonine permease | Morganella psychrotolerans | |
52 | group_15 | F4V73_RS05190 | 1104953 | 1106227 | 1 | amino acid permease | Morganella psychrotolerans | |
53 | group_438 | F4V73_RS06395 | 1334567 | 1335712 | 1 | tyrP | tyrosine transporter TyrP | Morganella psychrotolerans |
54 | group_19 | F4V73_RS07645 | 1599899 | 1601146 | 1 | mtr | tryptophan permease | Morganella psychrotolerans |
55 | group_18 | F4V73_RS07940 | 1654247 | 1655575 | -1 | tdcC | threonine/serine transporter TdcC | Morganella psychrotolerans |
56 | group_19 | F4V73_RS08145 | 1692461 | 1693723 | 1 | aromatic amino acid transporter | Morganella psychrotolerans | |
57 | group_15 | F4V73_RS09600 | 21125 | 22426 | -1 | amino acid permease | Morganella psychrotolerans | |
58 | group_19 | F4V73_RS13140 | 244486 | 245730 | -1 | mtr | tryptophan permease | Morganella psychrotolerans |
59 | group_15 | F4V73_RS14330 | 88392 | 89675 | -1 | aromatic amino acid transport family protein | Morganella psychrotolerans | |
60 | group_18 | PMI_RS03305 | 731056 | 732384 | -1 | HAAAP family serine/threonine permease | Proteus mirabilis HI4320 | |
61 | group_19 | PMI_RS04105 | 917328 | 918569 | -1 | mtr | tryptophan permease | Proteus mirabilis HI4320 |
62 | group_438 | PMI_RS08530 | 1859893 | 1861044 | 1 | tyrP | tyrosine transporter TyrP | Proteus mirabilis HI4320 |
63 | group_15 | PMI_RS13530 | 2999187 | 3000518 | -1 | amino acid permease | Proteus mirabilis HI4320 |