Homologs in group_18

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18 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06965 FBDBKF_06965 82.4 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_06970 FBDBKF_06970 80.4 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_15750 FBDBKF_15750 53.9 Morganella morganii S1 tdcC threonine/serine transporter TdcC
EHELCC_04000 EHELCC_04000 80.4 Morganella morganii S2 sdaC Amino acid permease
EHELCC_04005 EHELCC_04005 82.4 Morganella morganii S2 sdaC Amino acid permease
EHELCC_17665 EHELCC_17665 53.9 Morganella morganii S2 tdcC threonine/serine transporter TdcC
NLDBIP_04000 NLDBIP_04000 80.4 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_04005 NLDBIP_04005 82.4 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_19335 NLDBIP_19335 53.9 Morganella morganii S4 tdcC threonine/serine transporter TdcC
LHKJJB_09830 LHKJJB_09830 80.4 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_09835 LHKJJB_09835 82.4 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_18105 LHKJJB_18105 53.9 Morganella morganii S3 tdcC threonine/serine transporter TdcC
HKOGLL_09140 HKOGLL_09140 82.4 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_09145 HKOGLL_09145 80.4 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_18975 HKOGLL_18975 53.9 Morganella morganii S5 tdcC threonine/serine transporter TdcC
F4V73_RS01160 F4V73_RS01160 79.9 Morganella psychrotolerans - HAAAP family serine/threonine permease
F4V73_RS01165 F4V73_RS01165 79.5 Morganella psychrotolerans - HAAAP family serine/threonine permease
F4V73_RS07940 F4V73_RS07940 53.6 Morganella psychrotolerans tdcC threonine/serine transporter TdcC

Distribution of the homologs in the orthogroup group_18

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_18

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAD6 0.0 693 80 2 432 1 sdaC Serine transporter SdaC Escherichia coli (strain K12)
P0AAD7 0.0 693 80 2 432 3 sdaC Serine transporter SdaC Escherichia coli O157:H7
Q83QD0 0.0 681 78 2 432 3 sdaC Serine transporter SdaC Shigella flexneri
P44615 3.57e-167 479 60 5 420 3 sdaC Serine transporter SdaC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B7LQI2 1.08e-159 461 53 5 442 3 tdcC Threonine/serine transporter TdcC Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A6TAU9 2.68e-158 457 52 6 447 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XVZ7 2.68e-158 457 52 6 447 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae (strain 342)
A9MPR1 3.12e-158 457 53 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
A9N628 1.66e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8ZLW1 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TVX7 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella schwarzengrund (strain CVM19633)
B5BGF7 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain AKU_12601)
C0PZ16 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi C (strain RKS4594)
Q5PCA8 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TIX1 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella heidelberg (strain SL476)
B5REJ9 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QZS1 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella enteritidis PT4 (strain P125109)
B5FHX7 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella dublin (strain CT_02021853)
Q57JL7 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella choleraesuis (strain SC-B67)
B5F6Q0 1.71e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella agona (strain SL483)
A8AQ08 2.77e-157 455 52 4 435 3 tdcC Threonine/serine transporter TdcC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B4T6B2 1.88e-156 452 52 4 435 3 tdcC Threonine/serine transporter TdcC Salmonella newport (strain SL254)
B7MB46 1.38e-155 451 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O45:K1 (strain S88 / ExPEC)
Q31WR5 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 4 (strain Sb227)
B2U0A0 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R6L7 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain UTI89 / UPEC)
B6I491 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SE11)
Q8FDC3 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCY8 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AG28 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O1:K1 / APEC
B7M023 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O8 (strain IAI1)
B7N0B7 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O81 (strain ED1a)
B7LH53 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain 55989 / EAEC)
B7UJ20 1.61e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q32BK1 2.29e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Shigella dysenteriae serotype 1 (strain Sd197)
Q3YXB3 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Shigella sonnei (strain Ss046)
P0AAD8 2.84e-155 450 52 4 435 1 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12)
A8A4S9 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O9:H4 (strain HS)
B1XGT1 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / DH10B)
C4ZR30 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / MC4100 / BW2952)
B7NJY3 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YS06 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0AAD9 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7
A7ZS06 2.84e-155 450 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O139:H28 (strain E24377A / ETEC)
Q83Q28 4.3e-155 449 52 4 435 3 tdcC Threonine/serine transporter TdcC Shigella flexneri
Q0T0F2 4.3e-155 449 52 4 435 3 tdcC Threonine/serine transporter TdcC Shigella flexneri serotype 5b (strain 8401)
B1LFL8 4.3e-155 449 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SMS-3-5 / SECEC)
B7NDA4 4.3e-155 449 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1IRJ9 4.3e-155 449 52 4 435 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A4WEU1 1.44e-154 448 53 4 434 3 tdcC Threonine/serine transporter TdcC Enterobacter sp. (strain 638)
A1JIM8 3.28e-152 442 52 4 435 3 tdcC Threonine/serine transporter TdcC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
D0ZE09 1.13e-142 417 50 4 433 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda (strain EIB202)
Q4G4A7 7.57e-142 416 50 4 433 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda
P63340 3.26e-97 300 39 7 416 1 yqeG Inner membrane transport protein YqeG Escherichia coli (strain K12)
P63341 3.26e-97 300 39 7 416 3 yqeG Inner membrane transport protein YqeG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P63342 3.26e-97 300 39 7 416 3 yqeG Inner membrane transport protein YqeG Escherichia coli O157:H7
P42628 1.89e-31 128 25 12 438 1 dlsT Probable serine transporter Escherichia coli (strain K12)
Q8XAF5 2e-30 125 25 12 438 1 dlsT Serine transporter Escherichia coli O157:H7
P37660 4.08e-28 118 25 9 409 1 yhjV Inner membrane transport protein YhjV Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03305
Feature type CDS
Gene -
Product HAAAP family serine/threonine permease
Location 731056 - 732384 (strand: -1)
Length 1329 (nucleotides) / 442 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_18
Orthogroup size 19
N. genomes 7

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Genomic region

Domains

PF03222 Tryptophan/tyrosine permease family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03837 serine transporter - -

Protein Sequence

MDTTKAGSIAQGNTQSDYKTWRKSDTVWMLGLYGTAIGAGVLFLPINAGIGGLIPLLIMLVLAFPMTFFAHRGMCRFVLSGKNPGEDITEVVEEHFGKTAGVLITLLYFFAIYPILLVYSVAITNTVESFIVHQMHMTAPPRAILSLVLIVGIMCIIRFGEQAIVKAMSVLVFPFVAILMVLALYLIPEWNGAILDTLSFDHASTSGMSQGLLVTLWLAIPVMVFSFNHSPIISAFAVAKREEYGDNAEKKCSRILAYAHIMMVITVMFFVFSCVFSLTPENLAEAKEQNISILSYLANHFEAPVIAYIAPFIAFVAITKSFLGHYLGAREGFNGLIIKGMRGIGKNVEKDRLNKITALFMLVTTWIVATLNPSILGMIETLGGPIIAMLLFLMPMYAIRKVPAMKKYQGHISNVFVVIMGLIAISAVFYTLGNTFINYFFN

Flanking regions ( +/- flanking 50bp)

ACTCACTTTATTTTTCATTATTTTTTTACCGCGTTATTTCGGAGAGTATTATGGATACAACCAAAGCTGGTTCTATCGCACAGGGTAATACCCAAAGTGATTACAAAACATGGCGTAAGTCAGACACAGTATGGATGCTCGGTTTGTATGGTACAGCTATCGGTGCTGGCGTTCTGTTTTTACCTATCAATGCCGGGATTGGTGGCTTAATTCCTCTGTTGATTATGTTAGTACTTGCTTTTCCTATGACCTTTTTTGCACACCGTGGTATGTGTCGCTTTGTGCTATCAGGTAAAAATCCAGGTGAAGATATTACTGAAGTGGTTGAAGAACACTTTGGTAAAACAGCAGGTGTATTAATCACTCTGCTCTATTTCTTTGCTATTTATCCTATCTTGTTGGTTTACAGTGTCGCTATCACTAATACGGTAGAAAGCTTTATTGTTCACCAAATGCATATGACAGCACCACCTCGTGCGATTTTATCACTGGTACTGATTGTCGGTATTATGTGTATCATTCGCTTTGGTGAACAAGCTATTGTTAAAGCAATGAGTGTCTTAGTATTCCCATTCGTTGCCATCTTGATGGTACTTGCTTTATACCTCATTCCTGAATGGAATGGTGCCATTCTTGATACGCTCTCTTTTGATCACGCCTCAACTTCTGGTATGAGCCAAGGCTTGTTAGTAACCTTATGGTTAGCTATCCCTGTGATGGTGTTCTCTTTTAACCACTCACCAATCATCTCTGCTTTTGCTGTGGCAAAACGCGAAGAGTACGGTGACAATGCAGAGAAAAAATGTTCACGCATCTTAGCTTATGCTCATATCATGATGGTGATCACTGTTATGTTCTTCGTGTTTAGCTGCGTATTTAGCTTAACACCAGAAAATTTAGCAGAAGCAAAAGAGCAAAACATCAGTATTCTGTCTTATCTTGCTAACCACTTTGAAGCACCCGTTATCGCTTACATTGCACCTTTCATTGCCTTTGTTGCGATTACTAAATCTTTCTTAGGTCACTATTTAGGGGCTCGTGAAGGTTTCAATGGCTTAATTATCAAAGGGATGCGCGGAATTGGTAAGAATGTCGAAAAAGATCGTTTAAACAAAATCACAGCTCTGTTTATGTTGGTTACAACGTGGATCGTTGCAACATTAAACCCAAGTATCCTTGGTATGATTGAAACACTGGGTGGCCCAATCATCGCAATGTTACTGTTCTTAATGCCTATGTATGCTATCCGTAAAGTACCAGCGATGAAAAAATATCAAGGCCATATTAGCAACGTATTTGTTGTTATCATGGGTCTGATTGCAATCTCAGCGGTTTTCTACACCTTAGGTAACACTTTCATTAATTATTTCTTTAACTAATAAGTTTATCGATGGCTACTTTCTAAAATGAAAGTAGCCATATCGCTACA