Homologs in group_18

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18 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06965 FBDBKF_06965 50.8 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_06970 FBDBKF_06970 49.2 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_15750 FBDBKF_15750 100.0 Morganella morganii S1 tdcC threonine/serine transporter TdcC
EHELCC_04000 EHELCC_04000 49.2 Morganella morganii S2 sdaC Amino acid permease
EHELCC_04005 EHELCC_04005 50.8 Morganella morganii S2 sdaC Amino acid permease
EHELCC_17665 EHELCC_17665 100.0 Morganella morganii S2 tdcC threonine/serine transporter TdcC
NLDBIP_04000 NLDBIP_04000 49.2 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_04005 NLDBIP_04005 50.8 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_19335 NLDBIP_19335 100.0 Morganella morganii S4 tdcC threonine/serine transporter TdcC
LHKJJB_09830 LHKJJB_09830 49.2 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_09835 LHKJJB_09835 50.8 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_18105 LHKJJB_18105 100.0 Morganella morganii S3 tdcC threonine/serine transporter TdcC
HKOGLL_09140 HKOGLL_09140 50.8 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_09145 HKOGLL_09145 49.2 Morganella morganii S5 sdaC Amino acid permease
F4V73_RS01160 F4V73_RS01160 50.1 Morganella psychrotolerans - HAAAP family serine/threonine permease
F4V73_RS01165 F4V73_RS01165 48.0 Morganella psychrotolerans - HAAAP family serine/threonine permease
F4V73_RS07940 F4V73_RS07940 93.4 Morganella psychrotolerans tdcC threonine/serine transporter TdcC
PMI_RS03305 PMI_RS03305 53.9 Proteus mirabilis HI4320 - HAAAP family serine/threonine permease

Distribution of the homologs in the orthogroup group_18

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_18

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B7MB46 0.0 687 78 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O45:K1 (strain S88 / ExPEC)
Q31WR5 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 4 (strain Sb227)
B2U0A0 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R6L7 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain UTI89 / UPEC)
B6I491 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SE11)
Q8FDC3 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCY8 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AG28 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O1:K1 / APEC
B7M023 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O8 (strain IAI1)
B7N0B7 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O81 (strain ED1a)
B7LH53 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain 55989 / EAEC)
B7UJ20 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q3YXB3 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Shigella sonnei (strain Ss046)
P0AAD8 0.0 686 77 1 443 1 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12)
A8A4S9 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O9:H4 (strain HS)
B1XGT1 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / DH10B)
C4ZR30 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / MC4100 / BW2952)
B7NJY3 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YS06 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0AAD9 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7
A7ZS06 0.0 686 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O139:H28 (strain E24377A / ETEC)
Q83Q28 0.0 685 77 1 443 3 tdcC Threonine/serine transporter TdcC Shigella flexneri
Q0T0F2 0.0 685 77 1 443 3 tdcC Threonine/serine transporter TdcC Shigella flexneri serotype 5b (strain 8401)
B1LFL8 0.0 685 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SMS-3-5 / SECEC)
B7NDA4 0.0 685 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1IRJ9 0.0 685 77 1 443 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q32BK1 0.0 684 77 1 443 3 tdcC Threonine/serine transporter TdcC Shigella dysenteriae serotype 1 (strain Sd197)
A6TAU9 0.0 684 76 1 443 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XVZ7 0.0 684 76 1 443 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae (strain 342)
A9MPR1 0.0 681 77 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B7LQI2 0.0 681 76 1 441 3 tdcC Threonine/serine transporter TdcC Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A8AQ08 0.0 681 77 1 443 3 tdcC Threonine/serine transporter TdcC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8ZLW1 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TVX7 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella schwarzengrund (strain CVM19633)
B5BGF7 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain AKU_12601)
C0PZ16 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi C (strain RKS4594)
Q5PCA8 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TIX1 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella heidelberg (strain SL476)
B5REJ9 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QZS1 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella enteritidis PT4 (strain P125109)
B5FHX7 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella dublin (strain CT_02021853)
Q57JL7 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella choleraesuis (strain SC-B67)
B5F6Q0 0.0 679 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella agona (strain SL483)
A9N628 0.0 678 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T6B2 0.0 678 76 1 443 3 tdcC Threonine/serine transporter TdcC Salmonella newport (strain SL254)
A1JIM8 0.0 677 78 0 430 3 tdcC Threonine/serine transporter TdcC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A4WEU1 0.0 662 77 1 443 3 tdcC Threonine/serine transporter TdcC Enterobacter sp. (strain 638)
Q4G4A7 0.0 632 72 1 442 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda
D0ZE09 0.0 630 72 1 442 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda (strain EIB202)
P0AAD6 2.41e-150 437 51 5 444 1 sdaC Serine transporter SdaC Escherichia coli (strain K12)
P0AAD7 2.41e-150 437 51 5 444 3 sdaC Serine transporter SdaC Escherichia coli O157:H7
Q83QD0 1.7e-146 427 50 5 444 3 sdaC Serine transporter SdaC Shigella flexneri
P44615 1.56e-111 337 43 4 431 3 sdaC Serine transporter SdaC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P63340 1.24e-61 208 32 9 429 1 yqeG Inner membrane transport protein YqeG Escherichia coli (strain K12)
P63341 1.24e-61 208 32 9 429 3 yqeG Inner membrane transport protein YqeG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P63342 1.24e-61 208 32 9 429 3 yqeG Inner membrane transport protein YqeG Escherichia coli O157:H7
P42628 1.86e-24 108 25 15 449 1 dlsT Probable serine transporter Escherichia coli (strain K12)
Q8XAF5 1.89e-24 108 24 15 449 1 dlsT Serine transporter Escherichia coli O157:H7
P37660 7.12e-19 91 22 10 421 1 yhjV Inner membrane transport protein YhjV Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_18975
Feature type CDS
Gene tdcC
Product threonine/serine transporter TdcC
Location 5316 - 6644 (strand: -1)
Length 1329 (nucleotides) / 442 (amino acids)

Contig

Accession ZDB_710
Length 17998 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_18
Orthogroup size 19
N. genomes 7

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Genomic region

Domains

PF01490 Transmembrane amino acid transporter protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03838 threonine transporter - -

Protein Sequence

MSTDKTQIPAEYKSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGYGGLIPILIMLVLAYPIAFLCHRALARLCLSGKNPSGDITETVEEHFGKGGGVVITFLYFFAICPLLWIYGVTITNTFMAFWEQQLGMMPLNRGVVALILLLAMAVIIYFGKDLMVRVMSYLVFPFIASLVLLSLALIPYWNTAVFESVNADSFQLFGHSGILVTVWLGISIMVFSFNFSPIVSSFVVSKREEYEAACGKDFTEQKVNKIISRAGLLMVGVVMFFAFSCLFALSPANMAEAKEMNIPVLTYLAYHFNNVGGANGTLATILVWAAPIIALVAIFKSFFGHYLGTLEGMNGLLLKFAFGGDKNKVSVGKLNLISMVFIMGSTWFIAYINPNILDLIEAMGAPIIASLLCLLPMYAVNRVPALSKYKGQASNYFVTIIGLLTIGNIVFKLFV

Flanking regions ( +/- flanking 50bp)

GGTACCCACGAAAAATAATATTTGCATAGTCTTTTAAAAGGAAAAGCAACATGAGTACTGACAAAACCCAGATTCCGGCTGAGTATAAAAGCTGGCGTAAATCGGACACGACCTGGACACTCGGTCTGTTCGGTACTGCTATAGGTGCAGGGGTACTATTCTTCCCGATCCGTGCCGGTTACGGTGGCCTGATCCCGATTCTGATCATGCTGGTTCTGGCATATCCGATTGCGTTCTTATGTCACCGTGCATTAGCACGTTTATGTCTGTCAGGCAAAAATCCGTCAGGCGATATCACAGAAACTGTTGAAGAGCACTTTGGTAAAGGCGGTGGTGTTGTTATCACTTTCCTGTACTTCTTCGCAATCTGTCCGCTCCTGTGGATCTACGGCGTAACCATCACCAATACCTTTATGGCATTCTGGGAACAGCAGCTGGGCATGATGCCGCTGAACCGGGGTGTGGTTGCACTGATTCTGCTGTTAGCAATGGCTGTCATTATTTACTTCGGTAAAGATCTGATGGTCCGCGTCATGAGCTACCTGGTATTCCCGTTCATTGCCAGCCTGGTGCTGTTATCTCTGGCTCTGATCCCTTACTGGAACACAGCCGTATTTGAAAGCGTGAACGCAGACAGCTTCCAGCTGTTCGGTCACAGCGGTATCCTGGTAACAGTATGGCTGGGTATTTCCATCATGGTGTTCTCTTTCAACTTCTCACCAATCGTATCTTCTTTCGTGGTATCAAAACGTGAAGAATACGAAGCGGCGTGCGGTAAAGATTTCACCGAGCAGAAAGTTAACAAAATCATCTCCCGTGCAGGTTTACTGATGGTGGGTGTGGTTATGTTCTTCGCATTCAGCTGCCTGTTCGCGCTGTCTCCGGCTAACATGGCTGAAGCGAAAGAGATGAACATTCCTGTTCTGACTTACCTGGCTTACCACTTCAATAACGTGGGCGGCGCTAACGGTACTCTGGCAACTATCCTGGTCTGGGCTGCACCAATCATCGCACTGGTTGCAATCTTCAAATCCTTCTTCGGTCACTACCTGGGTACTCTGGAAGGTATGAACGGTCTGTTACTGAAATTTGCGTTCGGTGGCGACAAAAACAAAGTCAGCGTTGGTAAACTGAACCTGATCTCTATGGTGTTCATCATGGGTTCTACCTGGTTCATCGCTTACATCAACCCGAACATCCTGGACCTGATTGAAGCAATGGGTGCACCAATCATCGCATCACTGCTGTGCTTACTGCCAATGTATGCTGTTAACCGCGTACCGGCTCTGAGCAAATACAAAGGTCAGGCATCTAACTACTTTGTTACCATCATCGGTCTGCTGACCATCGGTAACATCGTGTTCAAACTGTTCGTATAATTCTGCTGACAGTTAATGACTGAAAACCCGCACTCACCGGAGTGCGGGTT