Homologs in group_513

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00415 FBDBKF_00415 64.4 Morganella morganii S1 tyrP tyrosine transporter TyrP
EHELCC_01130 EHELCC_01130 64.4 Morganella morganii S2 tyrP tyrosine transporter TyrP
NLDBIP_02330 NLDBIP_02330 64.4 Morganella morganii S4 tyrP tyrosine transporter TyrP
LHKJJB_03845 LHKJJB_03845 64.4 Morganella morganii S3 tyrP tyrosine transporter TyrP
HKOGLL_03200 HKOGLL_03200 64.4 Morganella morganii S5 tyrP tyrosine transporter TyrP
F4V73_RS06395 F4V73_RS06395 65.2 Morganella psychrotolerans tyrP tyrosine transporter TyrP

Distribution of the homologs in the orthogroup group_513

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_513

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAD5 1.45e-172 489 63 2 384 3 tyrP Tyrosine-specific transport system Shigella flexneri
P0AAD4 1.45e-172 489 63 2 384 1 tyrP Tyrosine-specific transport system Escherichia coli (strain K12)
P44727 1.25e-97 299 46 4 384 3 tyrP-A Tyrosine-specific transport system 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44747 1.17e-80 255 42 3 384 3 tyrP-B Tyrosine-specific transport system 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44614 5.8e-61 205 35 6 387 3 mtr Tryptophan-specific transport protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q02DS7 7.4e-59 199 32 4 386 1 mtr Tryptophan-specific transport protein Pseudomonas aeruginosa (strain UCBPP-PA14)
P0AAD3 6.7e-57 194 31 4 385 3 mtr Tryptophan-specific transport protein Shigella flexneri
P0AAD2 6.7e-57 194 31 4 385 1 mtr Tryptophan-specific transport protein Escherichia coli (strain K12)
Q8XB33 9.76e-49 173 31 5 391 3 tnaB Low affinity tryptophan permease Escherichia coli O157:H7
P23173 1.95e-48 172 30 5 391 1 tnaB Low affinity tryptophan permease Escherichia coli (strain K12)
Q47825 6.61e-46 165 30 5 390 3 tutB Tyrosine permease Enterobacter agglomerans
Q5E5M9 5.39e-40 149 30 10 364 3 VF_1172 Glutamine transporter 2 Aliivibrio fischeri (strain ATCC 700601 / ES114)
P28785 7.23e-40 149 29 4 379 2 tnaB Low affinity tryptophan permease Proteus vulgaris

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08530
Feature type CDS
Gene tyrP
Product tyrosine transporter TyrP
Location 1859893 - 1861044 (strand: 1)
Length 1152 (nucleotides) / 383 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_513
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03222 Tryptophan/tyrosine permease family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03834 tyrosine-specific transport protein - -

Protein Sequence

MLAMPLAAVGIGFSTMVLLLVGLWLLMSYTALLLVEVYQYNDPHTGLGSIAKRYLGIGGQVVTGLALLLLMYALTTAYISGAGELLASTLSSWIGHKITITQGIIIFTVIGGAVVGIGTTSVDMINRLLFTAKVIFLIFMLVVMLPHVEKVNLTSMPIAKGLVLSAIPVIFTSFGFHGSVPSIVSYMDGNIKKLRLIFIVGSAIPLIAYILWQLATLGAIPTTTFMGILAQESGLNGLLTAIRDVVATPRVNIAVNLFAALALATSFLGVALGLFDYLADLFKRSNRASGRFQSGLLTFVPPLFCALFFPNFVQALAYAAIALSILALLLPALLVWKVRQQKQTTEHYKVKGGKPALAIVFICGLVVIGIQIAITFNILPQVG

Flanking regions ( +/- flanking 50bp)

GCACTATAGGCAGTGTATTTATTGTTGCAGGAACAACAATTGGTGCAGGAATGTTGGCAATGCCACTTGCTGCTGTGGGTATTGGCTTTAGTACCATGGTGTTATTGCTGGTGGGCTTATGGCTATTAATGAGTTACACCGCGCTTTTATTAGTGGAAGTCTATCAATACAACGATCCCCATACAGGCCTTGGCTCTATTGCGAAACGTTATCTGGGTATTGGAGGACAAGTCGTTACAGGTTTAGCTTTGCTACTTCTTATGTATGCTTTAACAACGGCTTATATCAGTGGTGCGGGTGAATTATTAGCTTCGACTTTATCTTCTTGGATTGGTCATAAGATAACCATCACACAAGGTATCATTATCTTTACAGTTATTGGTGGTGCGGTAGTCGGTATTGGTACCACTTCTGTGGATATGATTAACCGCTTACTCTTTACAGCAAAAGTTATTTTCTTAATTTTTATGCTGGTAGTCATGTTACCCCATGTGGAAAAAGTCAACTTAACCTCTATGCCTATCGCTAAGGGGCTCGTTCTTTCTGCGATCCCGGTTATTTTTACCTCTTTTGGTTTCCACGGTAGTGTACCCAGTATTGTCAGTTACATGGATGGCAATATCAAAAAACTACGCCTAATATTTATCGTAGGTAGCGCAATCCCTCTTATTGCTTATATTTTATGGCAATTAGCAACATTAGGAGCTATTCCCACCACCACCTTTATGGGGATTTTAGCCCAAGAATCTGGCTTAAATGGTCTACTCACCGCCATCCGTGATGTGGTTGCTACACCGCGAGTCAATATTGCTGTCAACCTTTTCGCAGCCCTTGCACTCGCCACCTCTTTCTTAGGCGTAGCATTAGGATTATTTGATTATCTAGCTGATTTGTTTAAACGCAGTAATCGCGCATCTGGTCGTTTTCAATCTGGTTTATTAACCTTTGTTCCACCGCTATTCTGTGCGTTATTTTTCCCTAACTTTGTGCAAGCCTTAGCCTATGCCGCAATTGCTTTATCTATTCTCGCACTATTATTACCGGCACTACTGGTGTGGAAAGTAAGACAACAAAAGCAGACTACAGAGCATTATAAAGTTAAAGGCGGTAAGCCAGCCTTAGCTATTGTATTTATCTGCGGGTTAGTGGTGATTGGTATTCAAATAGCGATTACCTTTAATATATTGCCACAAGTGGGTTAATCACCATTAGCTGATAAAAATCAAATAAAAAGCAGGTGTTAATTGTAACA