Orthogroup:group_10


Homologs in group_10

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19 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02695 FBDBKF_02695 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_08400 FBDBKF_08400 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_10620 FBDBKF_10620 Morganella morganii S1 sdaC Amino acid permease
EHELCC_03165 EHELCC_03165 Morganella morganii S2 sdaC Amino acid permease
EHELCC_13125 EHELCC_13125 Morganella morganii S2 sdaC Amino acid permease
EHELCC_14955 EHELCC_14955 Morganella morganii S2 sdaC Amino acid permease
NLDBIP_00295 NLDBIP_00295 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_13465 NLDBIP_13465 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_14785 NLDBIP_14785 Morganella morganii S4 sdaC Amino acid permease
LHKJJB_01740 LHKJJB_01740 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_13090 LHKJJB_13090 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_14560 LHKJJB_14560 Morganella morganii S3 sdaC Amino acid permease
HKOGLL_01780 HKOGLL_01780 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_11940 HKOGLL_11940 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_13180 HKOGLL_13180 Morganella morganii S5 sdaC Amino acid permease
F4V73_RS05190 F4V73_RS05190 Morganella psychrotolerans - amino acid permease
F4V73_RS09600 F4V73_RS09600 Morganella psychrotolerans - amino acid permease
F4V73_RS14330 F4V73_RS14330 Morganella psychrotolerans - aromatic amino acid transport family protein
PMI_RS13530 PMI_RS13530 Proteus mirabilis HI4320 - amino acid permease

Distribution of group_10 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_10 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_10

Orthogroup content: 19 members

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This page summarizes the annotation of all members of the orthologous group group_10.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sdaC 15
2 - 4

Product

# Product Occurence
1 Amino acid permease 15
2 amino acid permease 3
3 aromatic amino acid transport family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0814 19 E Amino acid transport and metabolism (E) Amino acid permease

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K26603 12 inner membrane transport protein - -
K26604 7 cysteine uptake transport protein - -

Annotations of the 59 SwissProt hits

Annotation Number of occurrences
Inner membrane transport protein YhjV 1
Inner membrane transport protein YqeG 3
Probable serine transporter 1
Serine transporter 1
Serine transporter SdaC 4
Threonine/serine transporter TdcC 49

Protein length

Min length 424
Max length 443
Mean length (sd) 429.8 (4.3)
Median length 428.0

Protein length distribution