Homologs in group_13

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18 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11130 FBDBKF_11130 47.8 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_14845 FBDBKF_14845 56.5 Morganella morganii S1 mtr tryptophan permease
EHELCC_05095 EHELCC_05095 47.8 Morganella morganii S2 sdaC Amino acid permease
EHELCC_13710 EHELCC_13710 100.0 Morganella morganii S2 mtr tryptophan permease
EHELCC_15650 EHELCC_15650 56.5 Morganella morganii S2 mtr tryptophan permease
NLDBIP_05415 NLDBIP_05415 47.8 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_14155 NLDBIP_14155 100.0 Morganella morganii S4 mtr tryptophan permease
NLDBIP_16180 NLDBIP_16180 56.5 Morganella morganii S4 mtr tryptophan permease
LHKJJB_02295 LHKJJB_02295 47.8 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_08695 LHKJJB_08695 100.0 Morganella morganii S3 mtr tryptophan permease
LHKJJB_15660 LHKJJB_15660 56.5 Morganella morganii S3 mtr tryptophan permease
HKOGLL_08245 HKOGLL_08245 100.0 Morganella morganii S5 mtr tryptophan permease
HKOGLL_14780 HKOGLL_14780 56.5 Morganella morganii S5 mtr tryptophan permease
HKOGLL_15675 HKOGLL_15675 47.8 Morganella morganii S5 sdaC Amino acid permease
F4V73_RS07645 F4V73_RS07645 57.2 Morganella psychrotolerans mtr tryptophan permease
F4V73_RS08145 F4V73_RS08145 47.3 Morganella psychrotolerans - aromatic amino acid transporter
F4V73_RS13140 F4V73_RS13140 94.7 Morganella psychrotolerans mtr tryptophan permease
PMI_RS04105 PMI_RS04105 54.2 Proteus mirabilis HI4320 mtr tryptophan permease

Distribution of the homologs in the orthogroup group_13

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_13

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAD3 0.0 641 78 0 414 3 mtr Tryptophan-specific transport protein Shigella flexneri
P0AAD2 0.0 641 78 0 414 1 mtr Tryptophan-specific transport protein Escherichia coli (strain K12)
Q02DS7 0.0 531 63 2 417 1 mtr Tryptophan-specific transport protein Pseudomonas aeruginosa (strain UCBPP-PA14)
P44614 1.27e-149 433 54 3 401 3 mtr Tryptophan-specific transport protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P23173 1.27e-141 413 52 2 405 1 tnaB Low affinity tryptophan permease Escherichia coli (strain K12)
Q8XB33 1.81e-140 410 52 2 405 3 tnaB Low affinity tryptophan permease Escherichia coli O157:H7
Q47825 4.6e-127 376 48 3 413 3 tutB Tyrosine permease Enterobacter agglomerans
P28785 1.33e-106 323 43 1 396 2 tnaB Low affinity tryptophan permease Proteus vulgaris
P0AAD5 2.68e-64 214 34 2 398 3 tyrP Tyrosine-specific transport system Shigella flexneri
P0AAD4 2.68e-64 214 34 2 398 1 tyrP Tyrosine-specific transport system Escherichia coli (strain K12)
P44727 1.39e-41 154 28 4 384 3 tyrP-A Tyrosine-specific transport system 1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P44747 1.15e-39 149 31 7 413 3 tyrP-B Tyrosine-specific transport system 2 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q5E5M9 2.69e-25 109 23 9 368 3 VF_1172 Glutamine transporter 2 Aliivibrio fischeri (strain ATCC 700601 / ES114)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_07880
Feature type CDS
Gene mtr
Product tryptophan permease
Location 104662 - 105906 (strand: 1)
Length 1245 (nucleotides) / 414 (amino acids)
In genomic island -

Contig

Accession contig_8
Length 164760 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_13
Orthogroup size 19
N. genomes 7

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Genomic region

Domains

PF03222 Tryptophan/tyrosine permease family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03835 tryptophan-specific transport protein - -

Protein Sequence

MATVPASSVSPSVFGGAMIIGGTIIGAGMFSLPVVMSGAWFFWSIAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITRDLLGNGWNIINGLTIAFVLYILTYAYISASGSVLSHTFAQAGITLPARLGGFLFAMAVAFIVWLSTKAVSRMTTIVLGAKILTFFMTFGGLLWNVKPAVLLNVAQPDASYLPYVLFTLPFCLASFGFHGNVPSLMKYYGKEPGKIRRCLTIGTLMALVLYIIWMLGTMGNIPRPDFIPIAEKGGNIDVLVQALSGVLHSRGLELLLIVFSNFAVASSFLGVTLGLFDYLADLFKFDDSKIGRLKTAGVTFIPPMLGGLIYPNGFIYAIGFAGLAATVWAAIVPALLARASRKRFGSPQFRVWGGEPMIWLILGFGVLNAVVHILSSFSLLPVYR

Flanking regions ( +/- flanking 50bp)

CCTCCTGATTTCAAACATAATGGTAATACTAAGCCACCAGAGGTACTCTTATGGCTACTGTTCCTGCGTCCTCTGTTTCGCCGTCCGTATTCGGCGGAGCAATGATTATCGGCGGAACTATCATTGGTGCGGGGATGTTTTCCCTGCCGGTGGTAATGTCCGGTGCATGGTTTTTCTGGTCGATTGCAGCACTGGTATTCACCTGGTTTTGTATGCTGCACTCGGGATTAATGATCCTCGAAGCCAACCTGAATTACCGGATTGGTTCCAGTTTCGACACGATCACCCGCGATTTGCTGGGAAACGGCTGGAATATTATTAACGGCCTGACCATTGCGTTCGTCCTGTATATTCTGACTTATGCCTATATTTCCGCCAGCGGATCGGTGCTGAGCCACACCTTTGCACAGGCGGGGATCACTCTTCCGGCGCGCCTGGGCGGATTCCTGTTTGCCATGGCGGTCGCCTTTATTGTCTGGCTGAGTACTAAAGCGGTCAGCCGTATGACGACAATTGTGCTCGGTGCCAAAATCCTGACATTCTTTATGACATTCGGCGGCCTGCTGTGGAATGTGAAACCGGCGGTATTACTGAACGTGGCGCAGCCGGACGCTTCTTATCTGCCTTATGTCTTGTTTACGCTGCCGTTTTGTCTGGCCTCTTTCGGGTTCCACGGTAATGTGCCGAGCCTGATGAAATATTACGGCAAAGAACCCGGCAAAATCCGCCGCTGTCTGACAATCGGCACACTGATGGCGCTGGTGCTCTATATCATCTGGATGCTCGGCACGATGGGGAATATTCCGCGTCCGGACTTTATTCCGATTGCGGAGAAGGGCGGTAATATTGATGTGCTGGTTCAGGCGCTGAGCGGTGTACTGCACAGCCGGGGACTGGAGCTGCTGCTGATTGTGTTCTCGAACTTTGCGGTGGCCAGTTCGTTCCTCGGGGTGACGCTGGGGCTGTTTGATTATCTGGCGGATCTGTTCAAATTTGATGACAGCAAAATTGGCCGCCTGAAAACCGCCGGTGTCACCTTTATCCCGCCGATGCTGGGCGGATTGATCTATCCGAACGGTTTTATTTACGCCATCGGTTTTGCCGGTCTGGCGGCGACGGTCTGGGCGGCTATTGTCCCGGCACTGCTGGCCCGTGCATCCCGTAAACGCTTCGGCAGCCCGCAGTTCCGGGTCTGGGGCGGTGAGCCCATGATCTGGCTGATCCTGGGCTTCGGGGTACTGAACGCGGTGGTACATATTTTGTCGAGTTTCAGCCTGTTGCCGGTTTACCGGTAAGCCATTACGTAAGCGGCAGGATTGTTGAGATTAATGATCCTGTCCGCTGA