Orthogroup:group_13


Homologs in group_13

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20 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05275 FBDBKF_05275 Morganella morganii S1 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
FBDBKF_08920 FBDBKF_08920 Morganella morganii S1 nikE nickel import ATP-binding protein NikE
FBDBKF_11970 FBDBKF_11970 Morganella morganii S1 dppF dipeptide ABC transporter ATP-binding subunit DppF
EHELCC_10490 EHELCC_10490 Morganella morganii S2 nikE nickel import ATP-binding protein NikE
EHELCC_12315 EHELCC_12315 Morganella morganii S2 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
EHELCC_14335 EHELCC_14335 Morganella morganii S2 dppF dipeptide ABC transporter ATP-binding subunit DppF
NLDBIP_10835 NLDBIP_10835 Morganella morganii S4 nikE nickel import ATP-binding protein NikE
NLDBIP_12655 NLDBIP_12655 Morganella morganii S4 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
NLDBIP_15430 NLDBIP_15430 Morganella morganii S4 dppF dipeptide ABC transporter ATP-binding subunit DppF
LHKJJB_10520 LHKJJB_10520 Morganella morganii S3 nikE nickel import ATP-binding protein NikE
LHKJJB_12515 LHKJJB_12515 Morganella morganii S3 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
LHKJJB_15180 LHKJJB_15180 Morganella morganii S3 dppF dipeptide ABC transporter ATP-binding subunit DppF
HKOGLL_11130 HKOGLL_11130 Morganella morganii S5 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
HKOGLL_13580 HKOGLL_13580 Morganella morganii S5 nikE nickel import ATP-binding protein NikE
HKOGLL_14300 HKOGLL_14300 Morganella morganii S5 dppF dipeptide ABC transporter ATP-binding subunit DppF
F4V73_RS05730 F4V73_RS05730 Morganella psychrotolerans oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
F4V73_RS14685 F4V73_RS14685 Morganella psychrotolerans - dipeptide ABC transporter ATP-binding subunit DppF
PMI_RS07120 PMI_RS07120 Proteus mirabilis HI4320 oppF murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF
PMI_RS14045 PMI_RS14045 Proteus mirabilis HI4320 - peptide ABC transporter ATP-binding protein
PMI_RS14550 PMI_RS14550 Proteus mirabilis HI4320 - dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein

Distribution of group_13 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_13 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_13

Orthogroup content: 20 members

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This page summarizes the annotation of all members of the orthologous group group_13.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 oppF 7
2 nikE 5
3 dppF 5
4 - 3

Product

# Product Occurence
1 murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF 7
2 nickel import ATP-binding protein NikE 5
3 dipeptide ABC transporter ATP-binding subunit DppF 6
4 peptide ABC transporter ATP-binding protein 1
5 dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1123 5 O Posttranslational modification, protein turnover, chaperones (O) ABC-type glutathione transport system ATPase component, contains duplicated ATPase domain
COG1124 1 EP Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
COG4608 14 E Amino acid transport and metabolism (E) ABC-type oligopeptide transport system, ATPase component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02032 7 peptide/nickel transport system ATP-binding protein Quorum sensing -
K10824 5 nickel transport system ATP-binding protein [EC:7.2.2.11] ABC transporters -
K12372 7 dipeptide transport system ATP-binding protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00005 20 ABC transporter
PF08352 14 Oligopeptide/dipeptide transporter, C-terminal region

Annotations of the 800 SwissProt hits

Annotation Number of occurrences
ABC transporter ATP-binding protein YtrE 1
ABC transporter I family member 17 1
Aliphatic sulfonates import ATP-binding protein SsuB 10
Aliphatic sulfonates import ATP-binding protein SsuB 1 1
Aliphatic sulfonates import ATP-binding protein SsuB 2 1
Arginine transport ATP-binding protein ArgV 1
Arginine transport ATP-binding protein ArtM 1
Arginine transport ATP-binding protein ArtP 5
Bicarbonate transport ATP-binding protein CmpD 2
Carnitine transport ATP-binding protein OpuCA 2
Cell division ATP-binding protein FtsE 4
Choline transport ATP-binding protein OpuBA 1
Di/tripeptide transport ATP-binding protein DppD 1
Di/tripeptide transport ATP-binding protein DppF 1
Dipeptide transport ATP-binding protein DppD 7
Dipeptide transport ATP-binding protein DppF 3
Energy-coupling factor transporter ATP-binding protein EcfA 5
Energy-coupling factor transporter ATP-binding protein EcfA1 28
Energy-coupling factor transporter ATP-binding protein EcfA2 10
Fe(3+) ions import ATP-binding protein FbpC 27
Fe(3+) ions import ATP-binding protein FbpC 1 4
Fe(3+) ions import ATP-binding protein FbpC 2 4
General L-amino acid transport ATP-binding protein AapP 1
Glucose import ATP-binding protein GlcV 1
Glutamate transport ATP-binding protein GluA 2
Glutamine transport ATP-binding protein GlnQ 3
Glutathione import ATP-binding protein GsiA 16
Glycine betaine transport ATP-binding protein OpuAA 2
Glycine betaine/carnitine transport ATP-binding protein GbuA 1
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA 1
Glycine betaine/choline transport system ATP-binding protein OusV 1
Glycine betaine/proline betaine transport system ATP-binding protein ProV 2
Histidine/lysine/arginine/ornithine transport ATP-binding protein HisP 2
L-cystine import ATP-binding protein TcyC 1
L-cystine transport system ATP-binding protein TcyN 1
Lipoprotein-releasing system ATP-binding protein LolD 42
Macrolide export ATP-binding/permease protein MacB 1 1
Macrolide export ATP-binding/permease protein MacB 2 3
Maltose/maltodextrin import ATP-binding protein MalK 5
Metal-staphylopine import system ATP-binding protein CntD 2
Metal-staphylopine import system ATP-binding protein CntF 2
Methionine import ATP-binding protein MetN 140
Methionine import ATP-binding protein MetN 1 54
Methionine import ATP-binding protein MetN 2 54
Methionine import ATP-binding protein MetN 3 8
Methionine import ATP-binding protein MetN 4 1
Nickel import ATP-binding protein NikD 11
Nickel import ATP-binding protein NikE 16
Nickel import system ATP-binding protein NikE 9
Nitrate import ATP-binding protein NrtD 1
Nitrate transport protein NasD 1
Nopaline permease ATP-binding protein P 1
Octopine permease ATP-binding protein P 3
Oligopeptide transport ATP-binding protein AmiE 2
Oligopeptide transport ATP-binding protein AmiF 1
Oligopeptide transport ATP-binding protein AppD 1
Oligopeptide transport ATP-binding protein AppF 1
Oligopeptide transport ATP-binding protein OppD 8
Oligopeptide transport ATP-binding protein OppF 14
Peptide transport system ATP-binding protein SapD 5
Peptide transport system ATP-binding protein SapF 4
Peptidoglycan transport ATP-binding protein YejF 1
Phosphate import ATP-binding protein PstB 2 4
Phosphonates import ATP-binding protein PhnC 2
Probable D,D-dipeptide transport ATP-binding protein DdpD 1
Probable D,D-dipeptide transport ATP-binding protein DdpF 1
Probable amino-acid ABC transporter ATP-binding protein HI_1078 1
Probable amino-acid ABC transporter ATP-binding protein y4tH 1
Probable amino-acid import ATP-binding protein YxeO 1
Probable peptide ABC transporter ATP-binding protein y4tR 1
Probable peptide ABC transporter ATP-binding protein y4tS 1
Probable sulfate/thiosulfate import ATP-binding protein CysA 1
Putative ABC transporter ATP-binding protein MA_4020 1
Putative ABC transporter ATP-binding protein MM_0887 1
Putative ABC transporter ATP-binding protein MTBMA_c05830 1
Putative ABC transporter ATP-binding protein MTH_133 1
Putative oligopeptide transport ATP-binding protein YkfD 1
Putative peptide import ATP-binding protein BAB2_0817 1
Putative peptide import ATP-binding protein BAB2_0818 1
Putative peptide import ATP-binding protein BAB2_1052 1
Putative peptide import ATP-binding protein BAB2_1053 1
Putative peptide import ATP-binding protein BMEII0205 1
Putative peptide import ATP-binding protein BMEII0206 1
Putative peptide import ATP-binding protein BMEII0863 1
Putative peptide import ATP-binding protein BMEII0864 1
Putative peptide import ATP-binding protein BOV_A0347 1
Putative peptide import ATP-binding protein BOV_A0348 1
Putative peptide import ATP-binding protein BRA0404/BS1330_II0401 1
Putative peptide import ATP-binding protein BRA0405/BS1330_II0402 1
Putative peptide import ATP-binding protein BRA1094/BS1330_II1086 1
Putative peptide import ATP-binding protein BruAb2_0796 1
Putative peptide import ATP-binding protein BruAb2_0797 1
Putative peptide import ATP-binding protein BruAb2_1033 1
Putative peptide import ATP-binding protein BruAb2_1034 1
Putative phosphonates utilization ATP-binding protein PhnK 1
Putrescine export system ATP-binding protein SapD 1
Putrescine export system ATP-binding protein SapF 1
Putrescine transport ATP-binding protein PotG 1
Pyoverdine export ATP-binding/permease protein PvdT 1
Spermidine/putrescine import ATP-binding protein PotA 111
Spermidine/putrescine import ATP-binding protein PotA 1 1
Spermidine/putrescine import ATP-binding protein PotA 2 1
Sulfate/thiosulfate import ATP-binding protein CysA 52
Sulfate/thiosulfate import ATP-binding protein CysA (Fragment) 1
Sulfate/thiosulfate import ATP-binding protein CysA 1 4
Sulfate/thiosulfate import ATP-binding protein CysA 2 4
Sulfate/thiosulfate import ATP-binding protein cysA 1
Sulfoquinovosyl glycerol transport ATP-binding protein SmoE 1
Thiamine import ATP-binding protein ThiQ 2
Trehalose import ATP-binding protein SugC 2
Trehalose/maltose import ATP-binding protein MalK 1
Trimethylamine N-oxide transport system ATP-binding protein TmoW 2
Uncharacterized ABC transporter ATP-binding protein MJ0796 1
Uncharacterized ABC transporter ATP-binding protein MJ1508 1
Uncharacterized ABC transporter ATP-binding protein MT1014 1
Uncharacterized ABC transporter ATP-binding protein MT1318 1
Uncharacterized ABC transporter ATP-binding protein Mb1312c 1
Uncharacterized ABC transporter ATP-binding protein Rv0986 1
Uncharacterized ABC transporter ATP-binding protein Rv1281c 1
Uncharacterized ABC transporter ATP-binding protein YdcT 1
Uncharacterized ABC transporter ATP-binding protein YejF 1
Uncharacterized ABC transporter ATP-binding protein YvcR 1
Xylose/arabinose import ATP-binding protein XacJ 1
sn-glycerol-3-phosphate import ATP-binding protein UgpC 17
sn-glycerol-3-phosphate import ATP-binding protein UgpC 1 1
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 1
sn-glycerol-3-phosphate import ATP-binding protein UgpC 3 1

Protein length

Min length 250
Max length 335
Mean length (sd) 312.4 (31.5)
Median length 332.0

Protein length distribution