COG0747

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG0747
Protein list: lists the 34 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description ABC-type transport system, periplasmic component
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0747 is associated with 34 different proteins
The 34 proteins are classified into 5 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1031 FBDBKF_05305 67802 69370 1 ddpA ABC-type transport system, periplasmic component Morganella morganii S1
1 group_1073 FBDBKF_05620 130975 132663 1 sapA ABC transporter substrate-binding protein SapA Morganella morganii S1
2 group_1226 FBDBKF_06690 176814 178409 -1 ddpA ABC-type transport system, periplasmic component Morganella morganii S1
3 group_2811 FBDBKF_08940 5110 6684 -1 nikA nickel ABC transporter substrate-binding protein Morganella morganii S1
4 group_1757 FBDBKF_11990 46588 48204 -1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S1
5 group_1226 EHELCC_09735 177386 178981 -1 ddpA ABC-type transport system, periplasmic component Morganella morganii S2
6 group_2811 EHELCC_10470 139420 140994 1 nikA nickel ABC transporter substrate-binding protein Morganella morganii S2
7 group_1073 EHELCC_11970 48831 50519 -1 sapA ABC transporter substrate-binding protein SapA Morganella morganii S2
8 group_1031 EHELCC_12285 112124 113692 -1 ddpA ABC-type transport system, periplasmic component Morganella morganii S2
9 group_1757 EHELCC_14315 86501 88117 1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S2
10 group_1226 NLDBIP_10115 177386 178981 -1 ddpA ABC-type transport system, periplasmic component Morganella morganii S4
11 group_2811 NLDBIP_10815 117691 119265 1 nikA nickel ABC transporter substrate-binding protein Morganella morganii S4
12 group_1073 NLDBIP_12310 48786 50474 -1 sapA ABC transporter substrate-binding protein SapA Morganella morganii S4
13 group_1031 NLDBIP_12625 112079 113647 -1 ddpA ABC-type transport system, periplasmic component Morganella morganii S4
14 group_1757 NLDBIP_15410 90438 92054 1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S4
15 group_1226 LHKJJB_07640 38257 39852 1 ddpA ABC-type transport system, periplasmic component Morganella morganii S3
16 group_2811 LHKJJB_10540 72263 73837 -1 nikA nickel ABC transporter substrate-binding protein Morganella morganii S3
17 group_1073 LHKJJB_12170 48831 50519 -1 sapA ABC transporter substrate-binding protein SapA Morganella morganii S3
18 group_1031 LHKJJB_12485 112124 113692 -1 ddpA ABC-type transport system, periplasmic component Morganella morganii S3
19 group_1757 LHKJJB_15200 46588 48204 -1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S3
20 group_1226 HKOGLL_07190 38257 39852 1 ddpA ABC-type transport system, periplasmic component Morganella morganii S5
21 group_1073 HKOGLL_10785 48831 50519 -1 sapA ABC transporter substrate-binding protein SapA Morganella morganii S5
22 group_1031 HKOGLL_11100 112124 113692 -1 ddpA ABC-type transport system, periplasmic component Morganella morganii S5
23 group_2811 HKOGLL_13600 5564 7138 -1 nikA nickel ABC transporter substrate-binding protein Morganella morganii S5
24 group_1757 HKOGLL_14320 33251 34867 -1 dppA dipeptide ABC transporter periplasmic-binding protein DppA Morganella morganii S5
25 group_1073 F4V73_RS03685 782296 784005 -1 sapA ABC transporter substrate-binding protein SapA Morganella psychrotolerans
26 group_1031 F4V73_RS05760 1224560 1226128 1 ABC transporter substrate-binding protein Morganella psychrotolerans
27 group_1757 F4V73_RS14665 168180 169793 1 dipeptide ABC transporter periplasmic-binding protein DppA Morganella psychrotolerans
28 group_1226 F4V73_RS15250 35841 37436 1 ABC transporter substrate-binding protein Morganella psychrotolerans
29 group_1073 PMI_RS06655 1455927 1457618 1 sapA ABC transporter substrate-binding protein SapA Proteus mirabilis HI4320
30 group_1031 PMI_RS07165 1567449 1569014 1 ABC transporter substrate-binding protein Proteus mirabilis HI4320
31 group_1226 PMI_RS12440 2758158 2759741 -1 ABC transporter substrate-binding protein Proteus mirabilis HI4320
32 group_1757 PMI_RS14065 3122524 3124131 -1 ABC transporter substrate-binding protein Proteus mirabilis HI4320
33 group_2811 PMI_RS14570 3229951 3231528 -1 nikA nickel ABC transporter substrate-binding protein Proteus mirabilis HI4320