Homologs in group_1006

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_11970 EHELCC_11970 100.0 Morganella morganii S2 sapA ABC transporter substrate-binding protein SapA
NLDBIP_12310 NLDBIP_12310 100.0 Morganella morganii S4 sapA ABC transporter substrate-binding protein SapA
LHKJJB_12170 LHKJJB_12170 100.0 Morganella morganii S3 sapA ABC transporter substrate-binding protein SapA
HKOGLL_10785 HKOGLL_10785 100.0 Morganella morganii S5 sapA ABC transporter substrate-binding protein SapA
F4V73_RS03685 F4V73_RS03685 89.7 Morganella psychrotolerans sapA ABC transporter substrate-binding protein SapA
PMI_RS06655 PMI_RS06655 70.4 Proteus mirabilis HI4320 sapA ABC transporter substrate-binding protein SapA

Distribution of the homologs in the orthogroup group_1006

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1006

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q47622 0.0 797 71 1 529 3 sapA Probable ABC transporter periplasmic-binding protein SapA Escherichia coli (strain K12)
P36634 0.0 784 68 1 544 2 sapA Peptide transport periplasmic protein SapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P23847 2.27e-129 391 37 1 507 1 dppA Dipeptide-binding protein Escherichia coli (strain K12)
P45285 3.4e-127 387 38 7 547 3 sapA Peptide transport periplasmic protein SapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P33950 6.69e-121 370 36 5 521 1 hbpA Heme-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0A0H2ZGV2 1.1e-107 336 32 3 513 1 dppA1 Di/tripeptide-binding protein 1 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9HVS1 4.31e-106 332 32 3 505 1 PA4500 Dipeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGN2 5.3e-105 328 32 3 505 1 dppA3 Di/tripeptide-binding protein 3 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9HVS4 2.19e-103 324 35 4 506 1 PA4497 Tripeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGW2 1.27e-102 322 34 4 506 1 dppA2 Di/tripeptide-binding protein 2 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGV7 2.09e-102 322 33 3 504 1 dppA4 Di/tripeptide-binding protein 4 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZI72 1.31e-98 312 33 1 472 1 dppA5 Probable di/tripeptide-binding protein 5 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q8X6V9 4.5e-38 150 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O157:H7
Q32IB6 4.91e-38 150 27 15 500 3 gsiB Glutathione-binding protein GsiB Shigella dysenteriae serotype 1 (strain Sd197)
Q1RE95 5.63e-38 150 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli (strain UTI89 / UPEC)
Q8CW88 5.63e-38 150 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A968 5.63e-38 150 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O1:K1 / APEC
Q0T6D2 5.79e-38 150 26 15 501 3 gsiB Glutathione-binding protein GsiB Shigella flexneri serotype 5b (strain 8401)
Q821B3 6.98e-38 149 26 14 500 3 gsiB Glutathione-binding protein GsiB Shigella flexneri
P75797 7.26e-38 149 27 15 500 1 gsiB Glutathione-binding protein GsiB Escherichia coli (strain K12)
Q3Z3V3 7.48e-38 149 26 14 500 3 gsiB Glutathione-binding protein GsiB Shigella sonnei (strain Ss046)
Q323W4 9.74e-38 149 26 15 500 3 gsiB Glutathione-binding protein GsiB Shigella boydii serotype 4 (strain Sb227)
Q0TJL8 3.4e-37 147 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q57RB1 2.71e-36 145 26 16 511 3 gsiB Glutathione-binding protein GsiB Salmonella choleraesuis (strain SC-B67)
Q8Z863 9.29e-36 143 26 16 511 3 gsiB Glutathione-binding protein GsiB Salmonella typhi
Q8ZQM3 1.55e-35 143 26 16 511 3 gsiB Glutathione-binding protein GsiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PGP4 1.76e-35 142 25 16 512 3 gsiB Glutathione-binding protein GsiB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q6D3B0 1.47e-32 134 25 16 512 3 gsiB Glutathione-binding protein GsiB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P76128 5.55e-30 127 24 8 469 2 ddpA Probable D,D-dipeptide-binding periplasmic protein DdpA Escherichia coli (strain K12)
P42061 5.45e-24 109 23 13 445 1 appA Oligopeptide-binding protein AppA Bacillus subtilis (strain 168)
P24141 2.17e-22 104 21 14 478 1 oppA Oligopeptide-binding protein OppA Bacillus subtilis (strain 168)
P33590 3.92e-22 103 24 17 503 1 nikA Nickel-binding periplasmic protein Escherichia coli (strain K12)
P26906 2.22e-21 101 22 13 465 1 dppE Dipeptide-binding protein DppE Bacillus subtilis (strain 168)
P23843 6.52e-21 99 24 19 456 1 oppA Periplasmic oligopeptide-binding protein OppA Escherichia coli (strain K12)
Q46863 1.2e-16 86 23 23 557 1 ygiS Probable deoxycholate-binding periplasmic protein YgiS Escherichia coli (strain K12)
Q2YJK2 1.42e-16 86 24 10 407 3 BAB2_1049 Putative peptide-binding periplasmic protein BAB2_1049 Brucella abortus (strain 2308)
Q8VQK3 1.42e-16 86 24 10 407 3 BruAb2_1030 Putative peptide-binding periplasmic protein BruAb2_1030 Brucella abortus biovar 1 (strain 9-941)
Q8YDG6 1.43e-16 86 24 12 414 3 BMEII0210 Putative peptide-binding periplasmic protein BMEII0210 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P06202 2.37e-16 85 23 16 449 1 oppA Periplasmic oligopeptide-binding protein OppA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8FUX2 3.27e-16 85 24 12 414 3 BRA1090 Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 Brucella suis biovar 1 (strain 1330)
Q2G2P5 1.14e-15 83 22 7 327 1 nikA Nickel-binding protein NikA Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q8FWN7 3.41e-15 82 24 14 399 3 BRA0409 Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 Brucella suis biovar 1 (strain 1330)
Q2YK66 3.41e-15 82 24 14 399 3 BAB2_0812 Putative ABC transporter peptide-binding protein BAB2_0812 Brucella abortus (strain 2308)
Q577J8 3.41e-15 82 24 14 399 3 BruAb2_0792 Putative ABC transporter peptide-binding protein BruAb2_0792 Brucella abortus biovar 1 (strain 9-941)
A5VU91 3.41e-15 82 24 14 399 3 BOV_A0352 Putative ABC transporter peptide-binding protein BOV_A0352 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8YBP0 3.47e-15 82 24 14 399 3 BMEII0859 Putative ABC transporter peptide-binding protein BMEII0859 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P77348 8.54e-15 80 23 21 460 1 mppA Periplasmic murein peptide-binding protein MppA Escherichia coli (strain K12)
Q2FVE7 3.53e-13 75 21 10 404 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain NCTC 8325 / PS 47)
A0A0H3JTL0 3.99e-13 75 21 10 404 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain Mu50 / ATCC 700699)
P55669 6.68e-13 74 24 22 517 3 NGR_a01440 Probable peptide ABC transporter periplasmic-binding protein y4tO Sinorhizobium fredii (strain NBRC 101917 / NGR234)
A1JJG7 6.68e-11 68 23 15 360 3 sgrR HTH-type transcriptional regulator SgrR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P06109 1.86e-09 63 23 18 455 3 xp55 Protein XP55 Streptomyces lividans
P71370 2e-09 63 21 19 487 3 oppA Periplasmic oligopeptide-binding protein OppA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q6D0F8 1.07e-07 58 21 13 372 3 sgrR HTH-type transcriptional regulator SgrR Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P31306 2.53e-05 50 28 6 146 1 sarA Oligopeptide-binding protein SarA Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
P33913 4.64e-05 50 20 14 457 1 yejA Uncharacterized protein YejA Escherichia coli (strain K12)
Q8FW84 0.000515 46 20 6 236 3 BRA0576 Putative binding protein BRA0576/BS1330_II0571 Brucella suis biovar 1 (strain 1330)
Q8YC41 0.001 45 20 6 236 3 BMEII0691 Putative binding protein BMEII0691 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YKJ5 0.001 45 20 6 236 3 BAB2_0664 Putative binding protein BAB2_0664 Brucella abortus (strain 2308)
Q577X5 0.001 45 20 6 236 3 BruAb2_0648 Putative binding protein BruAb2_0648 Brucella abortus biovar 1 (strain 9-941)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_05620
Feature type CDS
Gene sapA
Product ABC transporter substrate-binding protein SapA
Location 130975 - 132663 (strand: 1)
Length 1689 (nucleotides) / 562 (amino acids)

Contig

Accession contig_5
Length 181448 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1006
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0747 Amino acid transport and metabolism (E) E ABC-type transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19226 cationic peptide transport system substrate-binding protein Cationic antimicrobial peptide (CAMP) resistance
ABC transporters		 -

Protein Sequence

MRHWIIRACAVLLPVSGFAAAPAPQTDQPVKPVTAQAAALPPVRDTGFVYCVNGNISTFNPQLASSGLIVEPLAAQIYDRLLDVDPYTYRLIPELAARWTVLDNGATYRFYLRRDTDFQTTDWFKPTRKMNADDVVFSFSRVVDKQNPYHYINGGRYPYFDSLQFASNVKSIRKINNYTVEFKLNTPDASFLWHLATHYAPVLSKEYADNLLKARRQEQLDWKPVGTGPYYLDDYQSGQFVRLQRHDNYRKGKPRMQEVVVDLGAGGTGRMSKLITGECDVLAYPAASQLQVLRDDPRLSLMLRPGMNIAYLAFNTSKPPFNNPQARRAIAFAINNERLMKSIYYGTAETAASILPRVSWAYDNQARVTEYNPEKAKAMLNELGLSGMTLNLWVPTASQSYNPSPLKMAELIQADLARAGIKMNIRPVEGRFQENSLMDRSHDITLAGWSTDSNDPDSFFRPLLSCAAIGSQTNLSHWCSPEFDDVIHQALLEQQLSSRIEYYHKAQQILAQDLPVLPLAYSLRLQAFRYDIKGLVLSAFGNTSFAGVYRDTGDDPEPEAEP

Flanking regions ( +/- flanking 50bp)

CGCACAAATTGCGATACAATGCCCTGTTCATTTTTAACGGTAACTGATTTATGCGCCATTGGATTATCCGGGCCTGTGCGGTTCTCCTGCCTGTTTCAGGCTTTGCCGCCGCACCCGCCCCGCAGACAGACCAGCCGGTAAAACCGGTCACGGCTCAGGCCGCCGCACTGCCGCCTGTCCGCGATACCGGTTTTGTCTATTGTGTGAACGGCAACATCAGTACATTTAACCCGCAACTGGCCAGCAGCGGGCTGATTGTCGAGCCGCTGGCGGCACAGATTTACGATCGCCTGCTGGATGTTGACCCTTACACCTACCGCCTGATCCCGGAACTGGCCGCCCGCTGGACAGTGCTGGATAACGGCGCGACCTACCGTTTTTATCTGCGCCGTGATACCGATTTTCAGACTACTGACTGGTTTAAACCGACCCGCAAAATGAATGCGGATGATGTGGTGTTCAGCTTTTCCCGCGTGGTGGATAAACAGAACCCGTATCACTATATCAACGGCGGCCGCTATCCTTATTTTGACAGTCTGCAGTTCGCGTCCAATGTTAAATCCATCCGCAAAATCAATAATTATACCGTTGAATTTAAACTGAATACGCCGGACGCTTCCTTCCTGTGGCATCTGGCAACCCATTACGCGCCGGTTCTGTCCAAAGAGTATGCCGATAACCTGCTGAAAGCCCGCCGTCAGGAACAGCTCGACTGGAAACCGGTCGGCACCGGGCCGTATTATCTGGATGATTACCAGAGCGGCCAATTTGTTCGTCTGCAGCGCCATGATAATTACCGCAAAGGCAAACCCCGCATGCAGGAAGTGGTGGTTGATCTCGGGGCGGGCGGCACCGGACGGATGTCAAAACTGATCACCGGTGAGTGTGATGTGCTGGCCTATCCCGCCGCCAGCCAGTTACAGGTGCTGCGCGACGACCCGCGTCTGAGCCTGATGCTGCGCCCGGGAATGAATATCGCGTATCTGGCATTTAATACCAGTAAACCGCCGTTTAATAATCCGCAGGCGCGCCGTGCAATTGCTTTCGCGATTAATAATGAGCGCCTGATGAAATCCATCTATTACGGCACGGCGGAAACCGCCGCGTCTATTCTGCCGCGCGTCTCCTGGGCGTATGATAACCAGGCCCGGGTGACGGAATATAATCCCGAAAAAGCTAAAGCGATGCTCAATGAGCTGGGACTCAGCGGTATGACACTGAATCTCTGGGTACCGACCGCCTCGCAGTCTTACAACCCCAGCCCGCTGAAAATGGCCGAGCTGATTCAGGCAGATCTGGCCCGTGCCGGGATAAAAATGAATATCCGTCCGGTTGAGGGGCGTTTTCAGGAAAACAGCCTGATGGATCGCAGCCACGATATTACCCTTGCAGGCTGGTCAACCGACAGTAATGACCCGGACAGTTTTTTCCGTCCGCTGCTCAGCTGTGCGGCTATCGGTTCGCAAACCAACCTCAGCCACTGGTGTTCCCCGGAATTTGATGATGTGATCCACCAGGCGCTGCTTGAGCAGCAACTGAGCAGCCGGATAGAGTATTATCACAAAGCGCAGCAGATTCTGGCACAGGATCTGCCGGTACTGCCGCTGGCCTATTCACTGCGGTTACAGGCATTCCGCTATGATATTAAAGGGCTGGTACTGAGCGCATTCGGTAATACCTCTTTTGCCGGTGTCTACCGTGATACCGGGGATGACCCGGAGCCGGAGGCTGAACCATGATTATTTTTATTCTGCGCCGTCTGCTGCTGGTGCTGATCACGCTCTGTTTT