Homologs in group_1006

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05620 FBDBKF_05620 89.7 Morganella morganii S1 sapA ABC transporter substrate-binding protein SapA
EHELCC_11970 EHELCC_11970 89.7 Morganella morganii S2 sapA ABC transporter substrate-binding protein SapA
NLDBIP_12310 NLDBIP_12310 89.7 Morganella morganii S4 sapA ABC transporter substrate-binding protein SapA
LHKJJB_12170 LHKJJB_12170 89.7 Morganella morganii S3 sapA ABC transporter substrate-binding protein SapA
HKOGLL_10785 HKOGLL_10785 89.7 Morganella morganii S5 sapA ABC transporter substrate-binding protein SapA
PMI_RS06655 PMI_RS06655 72.5 Proteus mirabilis HI4320 sapA ABC transporter substrate-binding protein SapA

Distribution of the homologs in the orthogroup group_1006

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1006

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q47622 0.0 799 69 2 548 3 sapA Probable ABC transporter periplasmic-binding protein SapA Escherichia coli (strain K12)
P36634 0.0 786 67 1 544 2 sapA Peptide transport periplasmic protein SapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P23847 4.7e-131 396 37 1 510 1 dppA Dipeptide-binding protein Escherichia coli (strain K12)
P45285 1.82e-127 388 37 7 542 3 sapA Peptide transport periplasmic protein SapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P33950 1.85e-123 377 36 4 504 1 hbpA Heme-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9HVS1 6.59e-111 344 33 3 505 1 PA4500 Dipeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZGV2 3.09e-110 342 33 3 502 1 dppA1 Di/tripeptide-binding protein 1 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGN2 6.7e-110 342 32 3 505 1 dppA3 Di/tripeptide-binding protein 3 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9HVS4 1.54e-100 317 33 5 519 1 PA4497 Tripeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZI72 1.96e-99 314 33 1 498 1 dppA5 Probable di/tripeptide-binding protein 5 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGW2 7.21e-99 313 33 4 503 1 dppA2 Di/tripeptide-binding protein 2 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGV7 7.32e-97 308 32 3 504 1 dppA4 Di/tripeptide-binding protein 4 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q8X6V9 1.68e-38 151 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O157:H7
Q0T6D2 1.78e-38 151 26 16 501 3 gsiB Glutathione-binding protein GsiB Shigella flexneri serotype 5b (strain 8401)
Q32IB6 1.96e-38 151 26 14 500 3 gsiB Glutathione-binding protein GsiB Shigella dysenteriae serotype 1 (strain Sd197)
Q1RE95 2e-38 151 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli (strain UTI89 / UPEC)
Q8CW88 2e-38 151 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A968 2e-38 151 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O1:K1 / APEC
Q821B3 2.74e-38 150 26 14 500 3 gsiB Glutathione-binding protein GsiB Shigella flexneri
Q3Z3V3 2.91e-38 150 26 14 500 3 gsiB Glutathione-binding protein GsiB Shigella sonnei (strain Ss046)
Q323W4 3.11e-38 150 26 16 500 3 gsiB Glutathione-binding protein GsiB Shigella boydii serotype 4 (strain Sb227)
P75797 3.27e-38 150 26 14 500 1 gsiB Glutathione-binding protein GsiB Escherichia coli (strain K12)
Q0TJL8 4.51e-38 150 26 14 500 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q57RB1 2.71e-35 142 25 17 514 3 gsiB Glutathione-binding protein GsiB Salmonella choleraesuis (strain SC-B67)
Q8Z863 1.2e-34 140 25 17 514 3 gsiB Glutathione-binding protein GsiB Salmonella typhi
Q5PGP4 1.42e-34 140 25 16 514 3 gsiB Glutathione-binding protein GsiB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8ZQM3 1.99e-34 140 25 17 514 3 gsiB Glutathione-binding protein GsiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q6D3B0 5.48e-33 135 25 16 512 3 gsiB Glutathione-binding protein GsiB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P76128 2.48e-32 134 25 10 469 2 ddpA Probable D,D-dipeptide-binding periplasmic protein DdpA Escherichia coli (strain K12)
P33590 2.18e-27 119 25 20 547 1 nikA Nickel-binding periplasmic protein Escherichia coli (strain K12)
P23843 8.9e-25 111 24 24 543 1 oppA Periplasmic oligopeptide-binding protein OppA Escherichia coli (strain K12)
P42061 1.12e-24 111 23 13 445 1 appA Oligopeptide-binding protein AppA Bacillus subtilis (strain 168)
P24141 2.28e-23 107 20 13 478 1 oppA Oligopeptide-binding protein OppA Bacillus subtilis (strain 168)
P26906 2.64e-22 104 22 13 465 1 dppE Dipeptide-binding protein DppE Bacillus subtilis (strain 168)
P06202 1.29e-20 99 23 22 514 1 oppA Periplasmic oligopeptide-binding protein OppA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q46863 9.43e-19 93 22 22 553 1 ygiS Probable deoxycholate-binding periplasmic protein YgiS Escherichia coli (strain K12)
Q2G2P5 9.04e-18 90 21 10 429 1 nikA Nickel-binding protein NikA Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q8FWN7 1.16e-17 89 25 14 398 3 BRA0409 Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 Brucella suis biovar 1 (strain 1330)
Q2YK66 1.16e-17 89 25 14 398 3 BAB2_0812 Putative ABC transporter peptide-binding protein BAB2_0812 Brucella abortus (strain 2308)
Q577J8 1.16e-17 89 25 14 398 3 BruAb2_0792 Putative ABC transporter peptide-binding protein BruAb2_0792 Brucella abortus biovar 1 (strain 9-941)
A5VU91 1.16e-17 89 25 14 398 3 BOV_A0352 Putative ABC transporter peptide-binding protein BOV_A0352 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8YBP0 1.23e-17 89 25 14 398 3 BMEII0859 Putative ABC transporter peptide-binding protein BMEII0859 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P77348 1.93e-17 89 23 21 460 1 mppA Periplasmic murein peptide-binding protein MppA Escherichia coli (strain K12)
P55669 4.73e-16 84 24 24 524 3 NGR_a01440 Probable peptide ABC transporter periplasmic-binding protein y4tO Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q2YJK2 5.48e-15 81 24 11 390 3 BAB2_1049 Putative peptide-binding periplasmic protein BAB2_1049 Brucella abortus (strain 2308)
Q8VQK3 5.48e-15 81 24 11 390 3 BruAb2_1030 Putative peptide-binding periplasmic protein BruAb2_1030 Brucella abortus biovar 1 (strain 9-941)
Q8YDG6 1.19e-14 80 24 11 390 3 BMEII0210 Putative peptide-binding periplasmic protein BMEII0210 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FUX2 2.93e-14 79 24 11 390 3 BRA1090 Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 Brucella suis biovar 1 (strain 1330)
Q2FVE7 1.34e-13 77 21 11 404 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain NCTC 8325 / PS 47)
A0A0H3JTL0 2.25e-13 76 21 10 404 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain Mu50 / ATCC 700699)
P71370 7.44e-11 68 22 23 497 3 oppA Periplasmic oligopeptide-binding protein OppA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O07570 1.58e-10 67 22 19 511 3 yhjP Uncharacterized protein YhjP Bacillus subtilis (strain 168)
P06109 2.88e-10 66 23 16 452 3 xp55 Protein XP55 Streptomyces lividans
Q6D0F8 8.83e-09 62 22 14 372 3 sgrR HTH-type transcriptional regulator SgrR Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P31306 1.13e-07 58 25 7 202 1 sarA Oligopeptide-binding protein SarA Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
P66772 6.26e-07 55 22 11 356 3 BQ2027_MB1311C Uncharacterized protein Mb1311c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WGU5 6.26e-07 55 22 11 356 1 Rv1280c Uncharacterized protein Rv1280c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGU4 6.26e-07 55 22 11 356 3 MT1317 Uncharacterized protein MT1317 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A4G1 6.22e-06 52 27 8 195 1 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4G0 6.22e-06 52 27 8 195 3 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q9RU24 1.78e-05 51 18 14 402 1 DR_1571 Probable ABC transporter-binding protein DR_1571 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q8FW84 2.45e-05 50 21 7 238 3 BRA0576 Putative binding protein BRA0576/BS1330_II0571 Brucella suis biovar 1 (strain 1330)
Q8YC41 4.3e-05 50 21 7 238 3 BMEII0691 Putative binding protein BMEII0691 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YKJ5 4.49e-05 50 21 7 238 3 BAB2_0664 Putative binding protein BAB2_0664 Brucella abortus (strain 2308)
Q577X5 4.49e-05 50 21 7 238 3 BruAb2_0648 Putative binding protein BruAb2_0648 Brucella abortus biovar 1 (strain 9-941)
A2RI74 0.000205 47 21 19 491 1 dppA Dipeptide-binding protein Lactococcus lactis subsp. cremoris (strain MG1363)
P35592 0.000401 47 24 10 194 3 aliA Oligopeptide-binding protein AliA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03685
Feature type CDS
Gene sapA
Product ABC transporter substrate-binding protein SapA
Location 782296 - 784005 (strand: -1)
Length 1710 (nucleotides) / 569 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1006
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0747 Amino acid transport and metabolism (E) E ABC-type transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19226 cationic peptide transport system substrate-binding protein Cationic antimicrobial peptide (CAMP) resistance
ABC transporters		 -

Protein Sequence

MRHWIIRACAVLLPVTGFAAAPAQQTPRPAEPAVVQAAPLTPVRDTGFVYCVNGNISTFNPQLVSSGLIVEPLAAQLYDRLLDVDPYTYRLIPELAARWTVLDNGATYRFYLRRDVEFQTTDWFTPTRKLTADDVVFSFSRIVDKQNPYHYVNGGRYPYFDSLRFASNVKSIRKINNHTVEIKLNTPDASFLWHLATHYAPVLSKEYADNLQKARRQEQIDWKPVGSGPYYLDDYQSGQFVRMQRHENYWKGKPRMQEVVVDVGAGGAGRMSKLITGECDVLAYPAASQLQVLRDDPRLRLMLRPGMNIAYLAFNTSKPPFNNLEARQAIAYAINNERLMKSIYYGTAETAASILPRVSWAYDNQARVTEYNPEKSKAMLEQLGLSGITLNLWVPTASQSYNPSPLKMAELIQADLAQVGITMNIRPVEGRFQENTLMDRSHDITLAGWSTDSNDPDSFFRPLLSCAAISSQTNLSHWCSPEFDDVIHQALLAQQLGSRIEYYHQAQQILAQDLPVLPLAYSLRLQAFRYDIKGLVLSTFGNTSFAGVYREEAEKPVTENKPVTQKETP

Flanking regions ( +/- flanking 50bp)

CGCACAAATTGCGATATAATACGGCGTTCATTATTAACGGTAATTTATTTATGCGCCATTGGATTATCCGGGCATGCGCGGTGCTGTTGCCCGTAACAGGTTTTGCCGCCGCACCTGCGCAACAGACACCCCGTCCGGCTGAACCGGCAGTGGTGCAGGCCGCACCACTGACACCTGTCCGGGATACCGGCTTTGTCTATTGTGTCAATGGTAATATCAGTACGTTTAACCCGCAGCTGGTCAGCAGCGGGCTGATTGTCGAGCCGCTGGCGGCACAGTTATATGACCGCCTGCTGGATGTTGACCCTTATACTTACCGGCTTATCCCCGAACTCGCCGCCCGCTGGACTGTGCTGGATAACGGCGCGACTTACCGCTTTTATCTGCGCCGTGATGTGGAATTTCAGACCACAGACTGGTTTACCCCGACACGCAAATTAACTGCCGATGATGTGGTGTTCAGTTTTTCCCGCATCGTGGATAAACAAAATCCGTATCATTATGTTAACGGCGGGCGCTATCCCTATTTTGACAGCCTCCGGTTCGCCTCCAATGTGAAGTCCATCCGCAAAATTAATAACCATACGGTGGAAATCAAACTTAACACGCCGGATGCCTCTTTTCTGTGGCATTTAGCCACCCATTACGCCCCTGTGCTTTCAAAAGAGTATGCTGATAATCTGCAAAAAGCGCGGCGCCAGGAGCAAATTGACTGGAAACCGGTCGGCTCCGGGCCATACTATCTGGATGATTATCAGAGCGGACAATTTGTCCGGATGCAGCGCCATGAAAACTACTGGAAAGGTAAGCCGCGTATGCAGGAAGTGGTGGTGGATGTCGGTGCGGGCGGTGCCGGGCGGATGTCAAAACTGATCACCGGCGAGTGTGATGTGCTGGCGTATCCTGCCGCCAGCCAGTTACAGGTACTGCGTGATGATCCGCGCCTGCGTCTGATGCTGCGCCCTGGCATGAATATCGCGTATCTGGCGTTTAATACCAGTAAGCCGCCGTTTAATAACCTGGAGGCGCGCCAGGCAATTGCCTACGCCATCAATAATGAACGGCTGATGAAATCTATTTATTACGGCACGGCAGAAACAGCGGCGTCTATTCTGCCCCGTGTTTCCTGGGCTTATGATAATCAGGCGCGGGTAACGGAGTACAATCCGGAAAAATCAAAAGCCATGCTGGAGCAGCTCGGACTGAGTGGTATTACACTGAATTTGTGGGTGCCGACCGCCTCGCAGTCTTATAACCCCAGCCCGCTGAAGATGGCGGAGCTTATCCAGGCGGATCTGGCGCAGGTCGGTATTACGATGAATATCCGCCCGGTCGAGGGGCGCTTTCAGGAGAATACCCTGATGGATCGCAGCCATGATATTACGCTCGCAGGCTGGTCGACAGACAGTAATGACCCAGACAGTTTTTTCCGCCCGTTACTCAGTTGCGCCGCAATCAGCTCTCAAACTAATCTGAGTCACTGGTGCTCCCCGGAATTTGATGATGTTATCCATCAGGCGCTGCTGGCACAGCAGTTAGGCAGCCGGATTGAATATTATCATCAGGCGCAGCAGATACTGGCACAAGACCTGCCGGTGCTGCCGCTGGCGTATTCACTGCGCTTACAGGCATTCCGCTATGATATCAAAGGGCTGGTGCTCAGTACCTTCGGAAATACCTCGTTTGCGGGTGTCTACCGGGAAGAGGCTGAAAAGCCGGTGACCGAAAACAAACCTGTGACGCAGAAGGAAACACCATGATCATCTTTATTCTGCGCCGCCTGTTGCTGATGCTTATTACCCTTTTCTTT