Homologs in group_1718

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11990 FBDBKF_11990 79.4 Morganella morganii S1 dppA dipeptide ABC transporter periplasmic-binding protein DppA
EHELCC_14315 EHELCC_14315 79.4 Morganella morganii S2 dppA dipeptide ABC transporter periplasmic-binding protein DppA
NLDBIP_15410 NLDBIP_15410 79.4 Morganella morganii S4 dppA dipeptide ABC transporter periplasmic-binding protein DppA
LHKJJB_15200 LHKJJB_15200 79.4 Morganella morganii S3 dppA dipeptide ABC transporter periplasmic-binding protein DppA
HKOGLL_14320 HKOGLL_14320 79.4 Morganella morganii S5 dppA dipeptide ABC transporter periplasmic-binding protein DppA
F4V73_RS14665 F4V73_RS14665 79.1 Morganella psychrotolerans - dipeptide ABC transporter periplasmic-binding protein DppA

Distribution of the homologs in the orthogroup group_1718

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1718

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23847 0.0 934 80 0 535 1 dppA Dipeptide-binding protein Escherichia coli (strain K12)
Q9HVS1 0.0 600 54 3 509 1 PA4500 Dipeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P33950 0.0 600 55 1 505 1 hbpA Heme-binding protein A Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0A0H2ZGN2 0.0 598 54 3 509 1 dppA3 Di/tripeptide-binding protein 3 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGV2 0.0 594 51 3 536 1 dppA1 Di/tripeptide-binding protein 1 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGV7 2.27e-174 505 48 2 508 1 dppA4 Di/tripeptide-binding protein 4 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0A0H2ZGW2 1.21e-169 493 44 1 508 1 dppA2 Di/tripeptide-binding protein 2 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q9HVS4 6.3e-169 491 44 1 509 1 PA4497 Tripeptide-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A0A0H2ZI72 8.8e-154 452 41 1 502 1 dppA5 Probable di/tripeptide-binding protein 5 Pseudomonas aeruginosa (strain UCBPP-PA14)
P36634 5.86e-121 369 35 1 511 2 sapA Peptide transport periplasmic protein SapA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q47622 7.34e-114 351 34 1 509 3 sapA Probable ABC transporter periplasmic-binding protein SapA Escherichia coli (strain K12)
P45285 1.02e-80 265 28 5 527 3 sapA Peptide transport periplasmic protein SapA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57RB1 3.22e-49 180 27 11 468 3 gsiB Glutathione-binding protein GsiB Salmonella choleraesuis (strain SC-B67)
Q8ZQM3 3.25e-49 180 28 11 468 3 gsiB Glutathione-binding protein GsiB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z863 4.98e-49 180 27 11 468 3 gsiB Glutathione-binding protein GsiB Salmonella typhi
Q5PGP4 1.85e-48 178 27 11 468 3 gsiB Glutathione-binding protein GsiB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q1RE95 6.91e-48 177 27 18 545 3 gsiB Glutathione-binding protein GsiB Escherichia coli (strain UTI89 / UPEC)
Q8CW88 6.91e-48 177 27 18 545 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A968 6.91e-48 177 27 18 545 3 gsiB Glutathione-binding protein GsiB Escherichia coli O1:K1 / APEC
Q32IB6 1.09e-47 176 27 12 467 3 gsiB Glutathione-binding protein GsiB Shigella dysenteriae serotype 1 (strain Sd197)
Q8X6V9 1.3e-47 176 27 12 467 3 gsiB Glutathione-binding protein GsiB Escherichia coli O157:H7
Q821B3 2.2e-47 175 27 12 467 3 gsiB Glutathione-binding protein GsiB Shigella flexneri
Q3Z3V3 2.31e-47 175 27 12 467 3 gsiB Glutathione-binding protein GsiB Shigella sonnei (strain Ss046)
P75797 4.03e-47 174 27 12 467 1 gsiB Glutathione-binding protein GsiB Escherichia coli (strain K12)
Q323W4 4.69e-47 174 27 12 467 3 gsiB Glutathione-binding protein GsiB Shigella boydii serotype 4 (strain Sb227)
Q0TJL8 6.96e-47 174 27 12 467 3 gsiB Glutathione-binding protein GsiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q6D3B0 1.28e-46 173 29 12 468 3 gsiB Glutathione-binding protein GsiB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q0T6D2 2.74e-46 172 27 12 468 3 gsiB Glutathione-binding protein GsiB Shigella flexneri serotype 5b (strain 8401)
P76128 2.89e-46 172 26 10 528 2 ddpA Probable D,D-dipeptide-binding periplasmic protein DdpA Escherichia coli (strain K12)
P42061 9.67e-38 149 26 15 515 1 appA Oligopeptide-binding protein AppA Bacillus subtilis (strain 168)
P33590 6.54e-37 146 26 18 498 1 nikA Nickel-binding periplasmic protein Escherichia coli (strain K12)
P24141 7.24e-37 147 26 14 478 1 oppA Oligopeptide-binding protein OppA Bacillus subtilis (strain 168)
P26906 2.95e-31 130 25 21 527 1 dppE Dipeptide-binding protein DppE Bacillus subtilis (strain 168)
Q46863 5.28e-31 129 25 17 512 1 ygiS Probable deoxycholate-binding periplasmic protein YgiS Escherichia coli (strain K12)
A0A0H3JTL0 9.13e-30 126 24 16 535 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q2FVE7 1.87e-29 125 23 15 532 1 cntA Metal-staphylopine-binding protein CntA Staphylococcus aureus (strain NCTC 8325 / PS 47)
P23843 4.05e-25 112 24 19 507 1 oppA Periplasmic oligopeptide-binding protein OppA Escherichia coli (strain K12)
P06202 7.5e-25 111 25 18 482 1 oppA Periplasmic oligopeptide-binding protein OppA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8YBP0 3.26e-23 106 28 9 332 3 BMEII0859 Putative ABC transporter peptide-binding protein BMEII0859 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FWN7 3.6e-23 106 28 9 332 3 BRA0409 Putative ABC transporter peptide-binding protein BRA0409/BS1330_II0406 Brucella suis biovar 1 (strain 1330)
Q2YK66 3.6e-23 106 28 9 332 3 BAB2_0812 Putative ABC transporter peptide-binding protein BAB2_0812 Brucella abortus (strain 2308)
Q577J8 3.6e-23 106 28 9 332 3 BruAb2_0792 Putative ABC transporter peptide-binding protein BruAb2_0792 Brucella abortus biovar 1 (strain 9-941)
A5VU91 3.6e-23 106 28 9 332 3 BOV_A0352 Putative ABC transporter peptide-binding protein BOV_A0352 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
P77348 1.32e-22 104 24 20 456 1 mppA Periplasmic murein peptide-binding protein MppA Escherichia coli (strain K12)
Q9RU24 5.95e-22 103 24 19 530 1 DR_1571 Probable ABC transporter-binding protein DR_1571 Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
P06109 2.27e-21 101 24 18 479 3 xp55 Protein XP55 Streptomyces lividans
Q8YDG6 1.29e-19 95 26 10 357 3 BMEII0210 Putative peptide-binding periplasmic protein BMEII0210 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YJK2 6.13e-19 93 26 10 357 3 BAB2_1049 Putative peptide-binding periplasmic protein BAB2_1049 Brucella abortus (strain 2308)
Q8VQK3 6.13e-19 93 26 10 357 3 BruAb2_1030 Putative peptide-binding periplasmic protein BruAb2_1030 Brucella abortus biovar 1 (strain 9-941)
P55669 6.55e-19 93 27 23 423 3 NGR_a01440 Probable peptide ABC transporter periplasmic-binding protein y4tO Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q8FUX2 8.69e-19 93 26 10 357 3 BRA1090 Putative peptide-binding periplasmic protein BRA1090/BS1330_II1082 Brucella suis biovar 1 (strain 1330)
P71370 1.2e-18 92 22 18 508 3 oppA Periplasmic oligopeptide-binding protein OppA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q2G2P5 1.43e-14 79 24 12 352 1 nikA Nickel-binding protein NikA Staphylococcus aureus (strain NCTC 8325 / PS 47)
A2RI74 8.9e-14 77 25 24 463 1 dppA Dipeptide-binding protein Lactococcus lactis subsp. cremoris (strain MG1363)
P31306 6.14e-11 68 24 13 345 1 sarA Oligopeptide-binding protein SarA Streptococcus gordonii (strain Challis / ATCC 35105 / BCRC 15272 / CH1 / DL1 / V288)
Q9CEK0 1.4e-10 67 25 15 362 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis (strain IL1403)
P18791 3.45e-10 66 23 13 376 1 amiA Oligopeptide-binding protein AmiA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P35592 8.03e-10 65 23 22 580 3 aliA Oligopeptide-binding protein AliA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P55691 3.04e-09 63 21 24 535 3 NGR_a00920 Uncharacterized protein y4wM Sinorhizobium fredii (strain NBRC 101917 / NGR234)
O07570 3.36e-09 63 23 16 354 3 yhjP Uncharacterized protein YhjP Bacillus subtilis (strain 168)
Q02VA9 6.04e-09 62 26 8 239 3 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. cremoris (strain SK11)
Q07741 8.7e-09 62 26 7 238 1 oppA Oligopeptide-binding protein OppA Lactococcus lactis subsp. lactis
Q2YKJ5 1.22e-08 61 20 15 412 3 BAB2_0664 Putative binding protein BAB2_0664 Brucella abortus (strain 2308)
Q577X5 1.22e-08 61 20 15 412 3 BruAb2_0648 Putative binding protein BruAb2_0648 Brucella abortus biovar 1 (strain 9-941)
Q8YC41 2.64e-08 60 20 15 412 3 BMEII0691 Putative binding protein BMEII0691 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P44572 1.39e-07 57 20 21 455 3 HI_0213 Putative binding protein HI_0213 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0A4G1 2.3e-07 57 24 18 419 1 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4G0 2.3e-07 57 24 18 419 3 aliB Oligopeptide-binding protein AliB Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q8FW84 3.1e-07 57 20 15 412 3 BRA0576 Putative binding protein BRA0576/BS1330_II0571 Brucella suis biovar 1 (strain 1330)
A9CKL4 2.52e-06 53 20 23 525 3 yejA Probable peptide-binding protein YejA Agrobacterium fabrum (strain C58 / ATCC 33970)
A9CIN5 3.05e-06 53 20 16 506 3 yepA Peptidoglycan-binding protein YepA Agrobacterium fabrum (strain C58 / ATCC 33970)
P66772 1.4e-05 51 20 11 345 3 BQ2027_MB1311C Uncharacterized protein Mb1311c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WGU5 1.4e-05 51 20 11 345 1 Rv1280c Uncharacterized protein Rv1280c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGU4 1.4e-05 51 20 11 345 3 MT1317 Uncharacterized protein MT1317 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14065
Feature type CDS
Gene -
Product ABC transporter substrate-binding protein
Location 3122524 - 3124131 (strand: -1)
Length 1608 (nucleotides) / 535 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1718
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0747 Amino acid transport and metabolism (E) E ABC-type transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12368 dipeptide transport system substrate-binding protein ABC transporters
Bacterial chemotaxis		 -

Protein Sequence

MRSSKKQTGLLTATIGLLALAISAGVQAKTLVYCSEGSPEGFNPQLFTSGTTYDASSVPLYDRLVEFKLGTTEITPGLAESWEVSDDGKVYTFHLRKGVSWHSNKEFKPTREFNADDVIYTFMRQMDPNHPYHKVSGGSYEYFTGMDMNNMIEKIEKVDDNTVRFVLTRSEAPFLADMAMDFASILSAEYADNMMKAGTPEKVDLNPIGTGPFQLQQYQKDSRILYKANDKYWGKKPDIDRLVFSITPDASVRYAKLQKNECQAMPYPNPADIAKMKQNKDIQLLEQPGLNVGYISFNVEKKPLDNQKVRQALSMAVNKDAIIEAVYQGAGQKAKNLIPPTMWGYNDDIVDYEYNPEKAKALLKEAGLADGFTIDLWAMPVQRPYNPNARRMAEMVQADWEKIGVKTKIVSYEWGEYLKRAKSGEHQAVMMGWTGDNGDPDNFFATLFSCAAKEQGSNYSKWCYKPFEDLIQPARITADHDKRVELYKQAQVVMHDQAPALIIAHSTVYEPISKKVENYVVDPLGKHHFNNVSLK

Flanking regions ( +/- flanking 50bp)

TTTTAAACAGGAAACCAAAAAACACAACAGAATAATGACGGAGAATAATGATGAGAAGCTCCAAAAAACAGACAGGGTTGCTAACCGCTACAATCGGCTTACTCGCTTTGGCTATTTCAGCGGGTGTGCAAGCGAAAACATTAGTGTACTGTTCAGAAGGCTCACCGGAAGGATTTAACCCCCAACTATTTACCTCAGGTACGACTTATGACGCAAGCTCAGTACCGCTTTATGATCGCTTAGTTGAGTTTAAACTCGGCACCACTGAAATTACTCCCGGCTTAGCTGAAAGTTGGGAAGTGAGCGATGATGGTAAGGTGTATACTTTCCATTTACGTAAAGGGGTTAGTTGGCATAGCAACAAAGAGTTTAAGCCCACTCGTGAATTTAACGCAGATGATGTGATATATACATTTATGCGTCAAATGGATCCAAATCATCCTTATCATAAAGTCTCTGGTGGAAGTTATGAATATTTCACTGGGATGGATATGAATAATATGATCGAGAAGATCGAAAAAGTGGATGACAATACGGTTCGCTTTGTACTTACCCGTTCAGAAGCGCCTTTCTTGGCTGATATGGCAATGGACTTCGCATCTATTCTTTCTGCCGAGTATGCAGATAATATGATGAAAGCAGGGACTCCTGAGAAAGTGGATCTCAATCCTATTGGTACGGGACCTTTCCAACTGCAACAATATCAAAAAGACTCACGTATTCTTTATAAAGCAAATGATAAATATTGGGGGAAAAAACCTGATATAGATCGTTTAGTTTTCTCTATTACGCCAGATGCCTCAGTTCGTTATGCCAAATTACAAAAGAACGAATGTCAGGCAATGCCTTACCCAAATCCTGCTGATATCGCCAAGATGAAACAAAATAAAGATATCCAGCTACTGGAACAACCCGGATTAAACGTGGGGTATATCTCTTTTAATGTGGAGAAAAAACCGCTCGATAACCAAAAAGTACGCCAAGCATTAAGTATGGCGGTGAATAAAGACGCCATTATTGAAGCTGTCTATCAAGGCGCAGGCCAGAAAGCGAAGAATCTTATTCCACCGACAATGTGGGGTTATAACGATGACATCGTCGATTATGAATATAACCCGGAAAAAGCCAAAGCACTGTTAAAAGAAGCCGGCCTTGCAGATGGCTTTACTATCGATTTATGGGCGATGCCAGTGCAACGACCATATAACCCTAATGCCCGCCGTATGGCTGAAATGGTACAAGCTGACTGGGAAAAAATTGGTGTGAAAACCAAGATCGTTAGTTATGAGTGGGGTGAATATCTGAAACGTGCTAAATCAGGTGAACACCAAGCAGTAATGATGGGCTGGACGGGAGATAACGGTGATCCTGATAACTTTTTTGCCACACTGTTTAGTTGCGCTGCGAAAGAGCAAGGCTCTAACTACTCGAAATGGTGTTATAAGCCGTTTGAAGATCTGATCCAGCCTGCGCGGATCACGGCAGATCACGATAAGCGTGTTGAGTTATATAAGCAAGCTCAAGTGGTGATGCATGACCAAGCGCCAGCATTGATTATTGCTCACTCCACGGTATATGAACCAATCAGTAAAAAAGTAGAGAACTATGTGGTCGACCCATTAGGTAAACACCACTTTAATAATGTCTCTCTAAAATAGTCGTGATATTAACGAGCTGAGTTATCTTTACCACGGTACTTCTCTGAGCG