COG0451


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0451, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 29 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Nucleoside-diphosphate-sugar epimerase
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)

Occurence in the database

COG0451 is associated with 29 different proteins (see tab "Protein list" and "Profile")
The 29 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_271 FBDBKF_05350 78768 79781 -1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S1
1 group_1200 FBDBKF_06940 52085 52912 1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S1
2 group_404 FBDBKF_16315 50805 51743 -1 rfaD ADP-glyceromanno-heptose 6-epimerase Morganella morganii S1
3 group_2175 FBDBKF_16360 59123 60073 -1 UDP-glucose 4-epimerase Morganella morganii S1
4 group_1200 EHELCC_04030 133274 134101 -1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S2
5 group_271 EHELCC_12240 101713 102726 1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S2
6 group_404 EHELCC_16350 50805 51743 -1 rfaD ADP-glyceromanno-heptose 6-epimerase Morganella morganii S2
7 group_2175 EHELCC_16395 59123 60073 -1 UDP-glucose 4-epimerase Morganella morganii S2
8 group_1200 NLDBIP_04030 133070 133897 -1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S4
9 group_271 NLDBIP_12580 101668 102681 1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S4
10 group_2175 NLDBIP_16945 2097 3047 1 UDP-glucose 4-epimerase Morganella morganii S4
11 group_404 NLDBIP_16990 10427 11365 1 rfaD ADP-glyceromanno-heptose 6-epimerase Morganella morganii S4
12 group_1200 LHKJJB_09860 133184 134011 -1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S3
13 group_271 LHKJJB_12440 101713 102726 1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S3
14 group_2175 LHKJJB_16865 5199 6149 1 UDP-glucose 4-epimerase Morganella morganii S3
15 group_404 LHKJJB_16910 13529 14467 1 rfaD ADP-glyceromanno-heptose 6-epimerase Morganella morganii S3
16 group_1200 HKOGLL_09115 57041 57868 1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S5
17 group_271 HKOGLL_11055 101713 102726 1 wcaG Nucleoside-diphosphate-sugar epimerase Morganella morganii S5
18 group_404 HKOGLL_16930 50805 51743 -1 rfaD ADP-glyceromanno-heptose 6-epimerase Morganella morganii S5
19 group_2175 HKOGLL_16975 59123 60073 -1 UDP-glucose 4-epimerase Morganella morganii S5
20 group_1200 F4V73_RS01125 236991 237818 1 SDR family oxidoreductase Morganella psychrotolerans
21 group_271 F4V73_RS05805 1235674 1236690 -1 NAD-dependent epimerase Morganella psychrotolerans
22 group_2175 F4V73_RS16250 61182 62186 -1 NAD(P)-dependent oxidoreductase Morganella psychrotolerans
23 group_2175 F4V73_RS17215 74863 75813 1 NAD-dependent epimerase/dehydratase family protein Morganella psychrotolerans
24 group_404 F4V73_RS17275 87549 88487 1 rfaD ADP-glyceromanno-heptose 6-epimerase Morganella psychrotolerans
25 group_1200 PMI_RS03280 724671 725492 1 SDR family oxidoreductase Proteus mirabilis HI4320
26 group_271 PMI_RS07210 1579323 1580330 -1 NAD-dependent epimerase Proteus mirabilis HI4320
27 group_404 PMI_RS15705 3488695 3489633 -1 rfaD ADP-glyceromanno-heptose 6-epimerase Proteus mirabilis HI4320
28 group_271 PMI_RS15765 3500964 3501974 -1 NAD-dependent epimerase Proteus mirabilis HI4320