Homologs in group_1200

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06940 FBDBKF_06940 100.0 Morganella morganii S1 wcaG Nucleoside-diphosphate-sugar epimerase
NLDBIP_04030 NLDBIP_04030 100.0 Morganella morganii S4 wcaG Nucleoside-diphosphate-sugar epimerase
LHKJJB_09860 LHKJJB_09860 100.0 Morganella morganii S3 wcaG Nucleoside-diphosphate-sugar epimerase
HKOGLL_09115 HKOGLL_09115 100.0 Morganella morganii S5 wcaG Nucleoside-diphosphate-sugar epimerase
F4V73_RS01125 F4V73_RS01125 84.0 Morganella psychrotolerans - SDR family oxidoreductase
PMI_RS03280 PMI_RS03280 58.2 Proteus mirabilis HI4320 - SDR family oxidoreductase

Distribution of the homologs in the orthogroup group_1200

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1200

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AD12 2.63e-103 305 58 2 274 1 yeeZ Protein YeeZ Escherichia coli (strain K12)
P0AD13 2.63e-103 305 58 2 274 3 yeeZ Protein YeeZ Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_04030
Feature type CDS
Gene wcaG
Product Nucleoside-diphosphate-sugar epimerase
Location 133274 - 134101 (strand: -1)
Length 828 (nucleotides) / 275 (amino acids)

Contig

Accession ZDB_214
Length 335585 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1200
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01370 NAD dependent epimerase/dehydratase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0451 Cell wall/membrane/envelope biogenesis (M) M Nucleoside-diphosphate-sugar epimerase

Protein Sequence

MKTVSIAGLGWLGMPLALHLADIGIRVKGTKTTPDGTEAVRMCGIECYMLNLTPEPECNADDLDAFLQTDILVITLPASRTAGGGYLYVKAVQNLVDLAAARGVPRVIFTGSTAVYGNQTGKLTENSQVDPVTESAKAIVEIEHWLNELPGVSADILRLAGLVGESRHAGRFLAGKTAVKGANQPVNLVHQDDVIAAIRLLIQRPHGGHLYNLCAPQHPSRAEFYPDMSRQINLLPPVFREEDITEGKEIDGSRICRELGFEYQYPDPGRMPMTE

Flanking regions ( +/- flanking 50bp)

GATAATTTACTGAAATTGAAGAAAAATAAGCCACAGAGAGGTCATGCACGATGAAAACAGTTTCCATCGCGGGGCTGGGCTGGCTGGGAATGCCGCTGGCACTGCATCTTGCGGATATCGGTATCCGTGTCAAAGGTACCAAAACCACGCCGGACGGCACAGAGGCGGTGAGGATGTGCGGTATTGAGTGTTATATGCTGAATCTGACACCAGAGCCGGAATGTAACGCTGATGATCTGGATGCTTTTTTGCAGACAGATATTCTGGTGATCACACTACCGGCATCAAGAACGGCGGGCGGTGGTTACCTGTATGTGAAGGCGGTGCAGAATCTGGTGGATCTGGCGGCGGCGCGCGGCGTGCCTCGGGTAATTTTTACCGGTTCAACAGCGGTTTACGGTAATCAGACCGGTAAGCTGACAGAGAACTCGCAGGTCGATCCGGTGACAGAATCCGCCAAAGCGATTGTTGAGATTGAACACTGGCTGAATGAGCTGCCGGGTGTTTCAGCGGATATTCTGCGTCTGGCCGGGCTGGTGGGGGAATCCCGTCATGCAGGGCGTTTCCTTGCGGGTAAAACGGCGGTGAAAGGGGCGAATCAGCCGGTCAATCTGGTGCATCAGGATGATGTGATTGCCGCGATCCGTTTGCTGATCCAGCGTCCGCACGGCGGTCATCTGTATAATCTGTGTGCGCCGCAGCACCCGTCACGGGCTGAATTTTATCCGGATATGTCCCGTCAGATTAATTTGCTGCCGCCGGTGTTCAGAGAAGAAGATATCACTGAAGGAAAAGAGATTGACGGCAGCCGCATCTGCCGGGAACTGGGCTTTGAGTATCAGTACCCTGATCCCGGCCGGATGCCGATGACGGAGTAAGTATTAACTGACCGGCAGTGCCACGATATCGCGGTACGCCGGGCGGGTTT