Homologs in group_2175

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16360 FBDBKF_16360 95.9 Morganella morganii S1 - UDP-glucose 4-epimerase
EHELCC_16395 EHELCC_16395 95.9 Morganella morganii S2 - UDP-glucose 4-epimerase
NLDBIP_16945 NLDBIP_16945 95.9 Morganella morganii S4 - UDP-glucose 4-epimerase
LHKJJB_16865 LHKJJB_16865 95.9 Morganella morganii S3 - UDP-glucose 4-epimerase
HKOGLL_16975 HKOGLL_16975 95.9 Morganella morganii S5 - UDP-glucose 4-epimerase
F4V73_RS16250 F4V73_RS16250 28.8 Morganella psychrotolerans - NAD(P)-dependent oxidoreductase

Distribution of the homologs in the orthogroup group_2175

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2175

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8X7P7 6.3e-106 315 48 4 316 1 gnu N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase Escherichia coli O157:H7
Q56623 1.14e-21 96 26 9 322 3 galE UDP-glucose 4-epimerase Vibrio cholerae
P55579 2.08e-15 79 28 10 249 3 NGR_a02350 Uncharacterized protein y4nG Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P53199 1.82e-14 76 27 17 344 1 ERG26 Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5PPL3 1.84e-14 76 26 9 265 2 Nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Rattus norvegicus
Q15738 1.94e-14 76 26 9 264 1 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Homo sapiens
Q3ZBE9 2.14e-14 76 30 8 208 2 NSDHL Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Bos taurus
P55584 2.44e-14 76 21 7 257 3 NGR_a02300 Uncharacterized protein y4nL Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q5A1B0 4.06e-14 75 27 17 345 1 ERG26 Sterol-4-alpha-carboxylate 3-dehydrogenase ERG26, decarboxylating Candida albicans (strain SC5314 / ATCC MYA-2876)
Q9R1J0 2.32e-13 73 25 10 280 1 Nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Mus musculus
B2FI29 1.86e-12 70 23 12 328 1 oleD 2-alkyl-3-oxoalkanoate reductase Stenotrophomonas maltophilia (strain K279a)
Q9FX01 2.6e-12 70 25 15 348 1 3BETAHSD/D1 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1 Arabidopsis thaliana
Q54L85 3.93e-12 69 25 7 240 3 nsdhl Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating Dictyostelium discoideum
Q8PDW5 9.93e-12 68 23 10 327 1 oleD 2-alkyl-3-oxoalkanoate reductase Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Q652A8 1.84e-11 67 29 9 213 2 UGE-3 UDP-glucose 4-epimerase 3 Oryza sativa subsp. japonica
B0M3E8 7.28e-11 65 28 8 213 1 UGE1 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 Pisum sativum
Q67ZE1 2.72e-10 64 24 12 290 1 3BETAHSD/D2 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 Arabidopsis thaliana
Q43070 4.75e-10 63 28 8 213 2 GALE UDP-glucose 4-epimerase Pisum sativum
Q8EG63 1.21e-09 62 24 14 336 1 oleD 2-alkyl-3-oxoalkanoate reductase Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
P22715 2.57e-09 61 27 15 307 3 galE UDP-glucose 4-epimerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
H1ZZB0 2.95e-09 60 19 4 286 1 auaH Aurachin B dehydrogenase Stigmatella aurantiaca
Q56093 3.45e-09 60 27 15 305 3 galE UDP-glucose 4-epimerase Salmonella typhi
Q6K2E1 1.28e-08 59 26 8 216 2 UGE-4 UDP-glucose 4-epimerase 4 Oryza sativa subsp. japonica
Q42605 1.57e-08 58 27 8 214 1 UGE1 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 Arabidopsis thaliana
Q9SN58 2.26e-08 58 27 8 212 1 UGE5 UDP-glucose 4-epimerase 5 Arabidopsis thaliana
O34886 2.56e-08 58 25 8 225 3 ytcB Uncharacterized UDP-glucose epimerase YtcB Bacillus subtilis (strain 168)
Q9SYM5 4.85e-08 57 28 13 265 1 RHM1 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 Arabidopsis thaliana
Q6ZDJ7 5.18e-08 57 26 8 211 2 UGE-2 UDP-glucose 4-epimerase 2 Oryza sativa subsp. japonica
Q9T0A7 5.5e-08 57 26 7 212 1 UGE2 UDP-glucose 4-epimerase 2 Arabidopsis thaliana
Q9LPG6 8.16e-08 57 28 13 269 1 RHM2 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 Arabidopsis thaliana
P09147 1.55e-07 55 25 14 304 1 galE UDP-glucose 4-epimerase Escherichia coli (strain K12)
P0DX24 1.75e-07 55 25 9 216 1 MN2019_09805 3-beta-hydroxysteroid dehydrogenase Mycolicibacterium neoaurum
Q9EQC1 2.67e-07 55 24 11 277 1 Hsd3b7 3 beta-hydroxysteroid dehydrogenase type 7 Mus musculus
O65781 3.74e-07 54 26 9 212 2 None UDP-glucose 4-epimerase GEPI48 Cyamopsis tetragonoloba
P21977 5.27e-07 53 25 14 288 3 galE UDP-glucose 4-epimerase Streptococcus thermophilus
O65780 5.85e-07 53 25 7 223 2 None UDP-glucose 4-epimerase GEPI42 Cyamopsis tetragonoloba
P55180 1e-06 53 23 12 345 3 galE UDP-glucose 4-epimerase Bacillus subtilis (strain 168)
Q8LDN8 1.38e-06 52 26 8 214 1 UGE3 Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 Arabidopsis thaliana
Q7WTB1 1.49e-06 52 24 13 301 2 galE UDP-glucose 4-epimerase Lactobacillus helveticus
Q9F7D4 2.72e-06 52 25 8 215 3 galE UDP-glucose 4-epimerase Yersinia pestis
Q8LNZ3 3.7e-06 51 24 7 211 2 UGE-1 UDP-glucose 4-epimerase 1 Oryza sativa subsp. japonica
Q9JRN7 4.22e-06 51 28 8 168 1 tld GDP-6-deoxy-D-talose 4-dehydrogenase Aggregatibacter actinomycetemcomitans
P75821 4.63e-06 51 21 7 239 3 ybjS Uncharacterized protein YbjS Escherichia coli (strain K12)
Q8H930 6.17e-06 51 23 8 190 2 UEL-1 Probable UDP-arabinose 4-epimerase 1 Oryza sativa subsp. japonica
C4K8I6 1.03e-05 50 25 10 221 3 hldD ADP-L-glycero-D-manno-heptose-6-epimerase Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT)
Q05026 1.73e-05 49 24 12 292 3 galE UDP-glucose 4-epimerase Neisseria gonorrhoeae
Q9LH76 2.3e-05 49 27 11 245 2 RHM3 Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 Arabidopsis thaliana
O43050 3.16e-05 48 23 16 338 3 erg26 Sterol-4-alpha-carboxylate 3-dehydrogenase erg26, decarboxylating Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9C7W7 4.22e-05 48 25 8 213 1 UGE4 UDP-glucose 4-epimerase 4 Arabidopsis thaliana
D4GU72 5.11e-05 47 23 9 264 3 agl12 Low-salt glycan biosynthesis protein Agl12 Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
P56997 5.32e-05 48 28 9 214 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q54WS6 6.32e-05 48 25 9 236 3 tgds dTDP-D-glucose 4,6-dehydratase Dictyostelium discoideum
Q8VDR7 0.000109 47 25 12 237 2 Tgds dTDP-D-glucose 4,6-dehydratase Mus musculus
P96995 0.000109 47 27 6 151 3 galE UDP-glucose 4-epimerase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P48279 0.00016 46 28 3 110 3 ycf39 Photosystem II assembly factor Ycf39 Cyanophora paradoxa
P26503 0.000174 46 28 5 152 3 exoB UDP-glucose 4-epimerase Rhizobium meliloti (strain 1021)
P56986 0.000261 45 27 9 219 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup C
O84903 0.000341 45 29 6 152 3 galE UDP-glucose 4-epimerase Lacticaseibacillus casei
Q9HDU3 0.000341 45 25 7 213 3 gal10 Bifunctional protein gal10 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P18645 0.000357 45 26 11 223 2 Gale UDP-glucose 4-epimerase Rattus norvegicus
P13226 0.000371 45 24 5 149 3 galE UDP-glucose 4-epimerase Streptomyces lividans
P73212 0.000416 45 24 5 172 3 dfrA Putative dihydroflavonol 4-reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9KDV3 0.000643 44 28 8 179 3 galE UDP-glucose 4-epimerase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P56985 0.000651 44 26 7 211 3 galE UDP-glucose 4-epimerase Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P49534 0.000684 44 24 3 118 3 ycf39 Photosystem II assembly factor Ycf39 Trieres chinensis
Q553X7 0.000688 44 24 8 219 1 galE UDP-glucose 4-epimerase Dictyostelium discoideum
O35048 0.000717 44 23 11 278 2 Hsd3b7 3 beta-hydroxysteroid dehydrogenase type 7 Rattus norvegicus
Q3T105 0.000726 44 26 11 229 2 GALE UDP-glucose 4-epimerase Bos taurus
A6QLW2 0.000729 44 26 9 182 2 TGDS dTDP-D-glucose 4,6-dehydratase Bos taurus
P09609 0.000735 45 23 8 214 2 GAL10 Bifunctional protein GAL10 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
O95455 0.000848 44 26 9 182 1 TGDS dTDP-D-glucose 4,6-dehydratase Homo sapiens
P47364 0.001 43 26 9 176 3 galE UDP-glucose 4-epimerase Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P26150 0.001 44 25 10 226 1 Hsd3b3 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 3 Mus musculus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17215
Feature type CDS
Gene -
Product NAD-dependent epimerase/dehydratase family protein
Location 74863 - 75813 (strand: 1)
Length 951 (nucleotides) / 316 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2175
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF01370 NAD dependent epimerase/dehydratase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0451 Cell wall/membrane/envelope biogenesis (M) M Nucleoside-diphosphate-sugar epimerase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19997 GlcNAc-P-P-Und epimerase [EC:5.1.3.26] - -

Protein Sequence

MITIIGGSGFIGTRLSTQLQKDNIQFKIVDIEKSSAFSDHWEFGDITKPESLVEPLKGSDVIINLAAKHKDNVHPISLYYDVNVDGAKHVCDVAAQLGIKHIIFTSSVAVYGFVEKETGEDGQYEPFNDYGKSKLAAEHVYDAWQAEDAERALVTIRPTVVFGENNRGNVYNLFRQIASGRFLMIGGGKNQKSMAYVENIAAFLKFATTFNSGRHVFNYVDKPDFNMEDLTDIICKAMDKHKSNIHVPYSVGLLGGYCFDILAKVTGKEFPVSSIRIKKFCARTQFKSDVIADTGFIAPVSLEQGIANTVRHEFKK

Flanking regions ( +/- flanking 50bp)

CTTCAATTCTGAATATTATTTATAAAAAATTAAGAAAATAGAAGGCATTTATGATAACCATCATCGGCGGCTCAGGCTTTATCGGTACACGTCTGTCCACACAATTGCAGAAAGACAATATCCAATTTAAAATAGTAGATATTGAGAAAAGTTCAGCATTTTCTGATCACTGGGAATTTGGTGATATAACAAAACCAGAATCTCTGGTTGAACCGCTAAAAGGTTCCGATGTTATTATTAACCTGGCAGCCAAACATAAAGATAATGTCCATCCAATCAGTCTTTACTATGATGTGAATGTTGACGGTGCAAAGCATGTTTGTGATGTCGCGGCACAGCTTGGTATCAAACACATTATCTTTACCTCGTCTGTTGCTGTTTATGGCTTTGTCGAAAAAGAGACCGGGGAAGATGGTCAATATGAGCCATTCAATGATTATGGTAAATCAAAATTAGCCGCAGAGCATGTGTATGACGCCTGGCAAGCTGAAGATGCCGAACGTGCATTAGTGACAATCCGCCCGACTGTTGTCTTCGGTGAAAATAACCGGGGTAATGTTTATAATTTATTCCGTCAGATCGCATCAGGACGTTTCCTGATGATTGGCGGTGGTAAAAACCAGAAGTCTATGGCTTATGTGGAAAATATCGCAGCATTCTTAAAATTCGCCACAACCTTTAATTCAGGCCGTCATGTCTTTAACTATGTCGATAAACCTGATTTCAATATGGAAGATTTGACGGATATTATCTGCAAAGCGATGGATAAACATAAATCGAATATCCATGTTCCATACAGCGTCGGTTTGCTGGGTGGTTACTGTTTTGATATTCTGGCAAAAGTAACGGGTAAAGAATTTCCTGTCAGCAGTATTCGCATTAAGAAATTCTGTGCTCGTACACAATTTAAATCTGACGTTATTGCAGATACCGGGTTTATTGCTCCTGTTTCTCTCGAACAAGGAATAGCAAATACTGTTCGCCACGAATTTAAAAAATAGTACAAACCATGCTTAACATCGTCCTGTTCGAACCTGAAATACCGCCGAAC