Orthogroup:group_2205



Homologs in group_2205

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16315 FBDBKF_16315 Morganella morganii S1 rfaD ADP-glyceromanno-heptose 6-epimerase
EHELCC_16350 EHELCC_16350 Morganella morganii S2 rfaD ADP-glyceromanno-heptose 6-epimerase
NLDBIP_16990 NLDBIP_16990 Morganella morganii S4 rfaD ADP-glyceromanno-heptose 6-epimerase
LHKJJB_16910 LHKJJB_16910 Morganella morganii S3 rfaD ADP-glyceromanno-heptose 6-epimerase
HKOGLL_16930 HKOGLL_16930 Morganella morganii S5 rfaD ADP-glyceromanno-heptose 6-epimerase
F4V73_RS17275 F4V73_RS17275 Morganella psychrotolerans rfaD ADP-glyceromanno-heptose 6-epimerase
PMI_RS15705 PMI_RS15705 Proteus mirabilis HI4320 rfaD ADP-glyceromanno-heptose 6-epimerase

Distribution of group_2205 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2205 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2205

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2205.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rfaD 7

Product

# Product Occurence
1 ADP-glyceromanno-heptose 6-epimerase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0451 7 M Cell wall/membrane/envelope biogenesis (M) Nucleoside-diphosphate-sugar epimerase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01370 7 NAD dependent epimerase/dehydratase family

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG000332 6 ADP-L-glycero-D-mannoheptose-6-epimerase VF0044 Immune modulation
VFG013409 1 ADP-L-glycero-D-mannoheptose-6-epimerase VF0044 Immune modulation

Annotations of the 266 SwissProt hits

Annotation Number of occurrences
3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase 4
3-beta-hydroxysteroid dehydrogenase 1
ADP-L-glycero-D-manno-heptose-6-epimerase 158
Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 2
Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 1
Bifunctional protein GAL10 3
Bifunctional protein gal10 1
D-erythronate dehydrogenase 2
GDP-6-deoxy-D-mannose reductase 1
GDP-D-glycero-alpha-D-manno-heptose dehydrogenase 1
GDP-mannose 3,5-epimerase 1
GDP-mannose 3,5-epimerase 1 2
GDP-mannose 3,5-epimerase 2 1
Low-salt glycan biosynthesis protein Agl12 1
Polyketide synthase-nonribosomal peptide synthetase ffsA 1
Polyketide synthase-nonribosomal peptide synthetase pyiS 1
Probable UDP-arabinose 4-epimerase 1 1
Probable UDP-arabinose 4-epimerase 2 1
Probable UDP-arabinose 4-epimerase 3 2
Probable low-salt glycan biosynthesis reductase Agl14 1
Protein CapI 1
Putative UDP-arabinose 4-epimerase 2 1
Putative UDP-arabinose 4-epimerase 4 1
Putative UDP-glucose 4-epimerase 1
Short-chain dehydrogenase/reductase family 42E member 1 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 1
Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 1
UDP-N-acetylglucosamine 4-epimerase 1
UDP-arabinose 4-epimerase 1 1
UDP-glucose 4-epimerase 32
UDP-glucose 4-epimerase 1 1
UDP-glucose 4-epimerase 2 2
UDP-glucose 4-epimerase 3 1
UDP-glucose 4-epimerase 4 2
UDP-glucose 4-epimerase 5 1
UDP-glucose 4-epimerase GEPI42 1
UDP-glucose 4-epimerase GEPI48 1
UDP-glucuronate 4-epimerase 1
UDP-glucuronate 4-epimerase 1 1
UDP-glucuronate 4-epimerase 2 1
UDP-glucuronate 4-epimerase 3 1
UDP-glucuronate 4-epimerase 4 1
UDP-glucuronate 4-epimerase 6 1
UDP-glucuronic acid decarboxylase 1 7
UDP-glucuronic acid decarboxylase 2 1
UDP-glucuronic acid decarboxylase 4 1
UDP-glucuronic acid decarboxylase 6 1
Uncharacterized 37.6 kDa protein in cld 5'region 1
Uncharacterized UDP-glucose epimerase YtcB 1
Uncharacterized protein MJ1055 1
Vi polysaccharide biosynthesis protein VipB/TviC 1
dTDP-4-dehydro-6-deoxyglucose reductase 1
dTDP-4-keto-6-deoxy-D-glucose reductase 1
dTDP-D-glucose 4,6-dehydratase 4
dTDP-glucose 4,6-dehydratase 3

Protein length

Unique protein length 312

Protein length distribution