COG0444

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG0444
Protein list: lists the 27 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Function(s) descr. Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)

Occurence in the database

COG0444 is associated with 27 different proteins
The 27 proteins are classified into 4 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1029 FBDBKF_05280 60751 61725 -1 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S1
1 group_1033 FBDBKF_05320 71310 72158 1 dppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S1
2 group_3287 FBDBKF_08925 2507 3301 -1 nikD nickel import ATP-binding protein NikD Morganella morganii S1
3 group_311 FBDBKF_11975 43459 44442 -1 dppD dipeptide ABC transporter ATP-binding protein Morganella morganii S1
4 group_3287 EHELCC_10485 142803 143597 1 nikD nickel import ATP-binding protein NikD Morganella morganii S2
5 group_1033 EHELCC_12270 109336 110184 -1 dppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S2
6 group_1029 EHELCC_12310 119769 120743 1 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S2
7 group_311 EHELCC_14330 90263 91246 1 dppD dipeptide ABC transporter ATP-binding protein Morganella morganii S2
8 group_3287 NLDBIP_10830 121074 121868 1 nikD nickel import ATP-binding protein NikD Morganella morganii S4
9 group_1033 NLDBIP_12610 109291 110139 -1 dppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S4
10 group_1029 NLDBIP_12650 119724 120698 1 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S4
11 group_311 NLDBIP_15425 94200 95183 1 dppD dipeptide ABC transporter ATP-binding protein Morganella morganii S4
12 group_3287 LHKJJB_10525 69660 70454 -1 nikD nickel import ATP-binding protein NikD Morganella morganii S3
13 group_1033 LHKJJB_12470 109336 110184 -1 dppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S3
14 group_1029 LHKJJB_12510 119769 120743 1 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S3
15 group_311 LHKJJB_15185 43459 44442 -1 dppD dipeptide ABC transporter ATP-binding protein Morganella morganii S3
16 group_1033 HKOGLL_11085 109336 110184 -1 dppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S5
17 group_1029 HKOGLL_11125 119769 120743 1 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Morganella morganii S5
18 group_3287 HKOGLL_13585 2961 3755 -1 nikD nickel import ATP-binding protein NikD Morganella morganii S5
19 group_311 HKOGLL_14305 30122 31105 -1 dppD dipeptide ABC transporter ATP-binding protein Morganella morganii S5
20 group_1029 F4V73_RS05735 1217432 1218409 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
21 group_1033 F4V73_RS05775 1228113 1228961 1 ABC transporter ATP-binding protein Morganella psychrotolerans
22 group_311 F4V73_RS14680 171938 172921 1 dppD dipeptide ABC transporter ATP-binding protein Morganella psychrotolerans
23 group_1029 PMI_RS07125 1555713 1556699 -1 ABC transporter ATP-binding protein Proteus mirabilis HI4320
24 group_1033 PMI_RS07180 1570952 1571788 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320
25 group_311 PMI_RS14050 3119426 3120409 -1 dppD dipeptide ABC transporter ATP-binding protein Proteus mirabilis HI4320
26 group_311 PMI_RS14555 3227303 3228112 -1 ABC transporter ATP-binding protein Proteus mirabilis HI4320