Orthogroup:group_3287


Homologs in group_3287

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08925 FBDBKF_08925 Morganella morganii S1 nikD nickel import ATP-binding protein NikD
EHELCC_10485 EHELCC_10485 Morganella morganii S2 nikD nickel import ATP-binding protein NikD
NLDBIP_10830 NLDBIP_10830 Morganella morganii S4 nikD nickel import ATP-binding protein NikD
LHKJJB_10525 LHKJJB_10525 Morganella morganii S3 nikD nickel import ATP-binding protein NikD
HKOGLL_13585 HKOGLL_13585 Morganella morganii S5 nikD nickel import ATP-binding protein NikD

Distribution of group_3287 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3287 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3287

Orthogroup content: 5 members

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This page summarizes the annotation of all members of the orthologous group group_3287.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nikD 5

Product

# Product Occurence
1 nickel import ATP-binding protein NikD 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0444 5 EP Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00005 5 ABC transporter

Annotations of the 500 SwissProt hits

Annotation Number of occurrences
Aliphatic sulfonates import ATP-binding protein SsuB 3
Arginine transport ATP-binding protein ArgV 1
Choline transport ATP-binding protein OpuBA 1
Di/tripeptide transport ATP-binding protein DppD 1
Di/tripeptide transport ATP-binding protein DppF 1
Dipeptide transport ATP-binding protein DppD 7
Dipeptide transport ATP-binding protein DppF 3
Energy-coupling factor transporter ATP-binding protein EcfA1 7
Energy-coupling factor transporter ATP-binding protein EcfA2 4
Fe(3+) ions import ATP-binding protein FbpC 3
Fe(3+) ions import ATP-binding protein FbpC 1 1
Glutamine transport ATP-binding protein GlnQ 1
Glutathione import ATP-binding protein GsiA 16
Glycine betaine transport ATP-binding protein OpuAA 1
Glycine betaine/carnitine transport ATP-binding protein GbuA 1
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA 1
L-cystine transport system ATP-binding protein TcyN 1
Lipoprotein-releasing system ATP-binding protein LolD 4
Metal-staphylopine import system ATP-binding protein CntD 2
Metal-staphylopine import system ATP-binding protein CntF 2
Methionine import ATP-binding protein MetN 139
Methionine import ATP-binding protein MetN 1 54
Methionine import ATP-binding protein MetN 2 51
Methionine import ATP-binding protein MetN 3 7
Methionine import ATP-binding protein MetN 4 1
Molybdate/tungstate import ATP-binding protein WtpC 4
Molybdenum import ATP-binding protein ModC 2
Nickel import ATP-binding protein NikD 16
Nickel import ATP-binding protein NikE 11
Nickel import system ATP-binding protein NikD 9
Nickel import system ATP-binding protein NikE 9
Oligopeptide transport ATP-binding protein AmiE 2
Oligopeptide transport ATP-binding protein AmiF 1
Oligopeptide transport ATP-binding protein AppD 1
Oligopeptide transport ATP-binding protein AppF 1
Oligopeptide transport ATP-binding protein OppD 8
Oligopeptide transport ATP-binding protein OppF 12
Peptide transport system ATP-binding protein SapD 5
Peptide transport system ATP-binding protein SapF 3
Peptidoglycan transport ATP-binding protein YejF 1
Phosphate import ATP-binding protein PstB 18
Phosphate import ATP-binding protein PstB 1 1
Phosphate import ATP-binding protein PstB 2 3
Phosphate import ATP-binding protein PstB 3 1
Probable ABC transporter ATP-binding protein PEB1C 2
Probable D,D-dipeptide transport ATP-binding protein DdpD 1
Probable D,D-dipeptide transport ATP-binding protein DdpF 1
Probable amino-acid ABC transporter ATP-binding protein y4tH 1
Probable amino-acid import ATP-binding protein YxeO 1
Probable iron transport system ATP-binding protein HI_0361 1
Probable peptide ABC transporter ATP-binding protein y4tR 1
Probable peptide ABC transporter ATP-binding protein y4tS 1
Putative 2-aminoethylphosphonate import ATP-binding protein PhnT 4
Putative ABC transporter ATP-binding protein BCE_2668 1
Putative ABC transporter ATP-binding protein PH0132 1
Putative ABC transporter ATP-binding protein PH1815 1
Putative ABC transporter ATP-binding protein PYRAB01300 1
Putative ABC transporter ATP-binding protein PYRAB03730 1
Putative HMP/thiamine import ATP-binding protein YkoD 1
Putative oligopeptide transport ATP-binding protein YkfD 1
Putative peptide import ATP-binding protein BAB2_0817 1
Putative peptide import ATP-binding protein BAB2_0818 1
Putative peptide import ATP-binding protein BAB2_1052 1
Putative peptide import ATP-binding protein BAB2_1053 1
Putative peptide import ATP-binding protein BMEII0205 1
Putative peptide import ATP-binding protein BMEII0206 1
Putative peptide import ATP-binding protein BMEII0863 1
Putative peptide import ATP-binding protein BMEII0864 1
Putative peptide import ATP-binding protein BOV_A0347 1
Putative peptide import ATP-binding protein BOV_A0348 1
Putative peptide import ATP-binding protein BRA0404/BS1330_II0401 1
Putative peptide import ATP-binding protein BRA0405/BS1330_II0402 1
Putative peptide import ATP-binding protein BRA1094/BS1330_II1086 1
Putative peptide import ATP-binding protein BruAb2_0796 1
Putative peptide import ATP-binding protein BruAb2_0797 1
Putative peptide import ATP-binding protein BruAb2_1033 1
Putative peptide import ATP-binding protein BruAb2_1034 1
Putative phosphonates utilization ATP-binding protein PhnK 1
Putrescine export system ATP-binding protein SapD 1
Putrescine export system ATP-binding protein SapF 1
Putrescine transport ATP-binding protein PotG 1
Spermidine/putrescine import ATP-binding protein PotA 27
Sulfate/thiosulfate import ATP-binding protein CysA 5
Sulfate/thiosulfate import ATP-binding protein CysA 1 1
Thiamine import ATP-binding protein ThiQ 1
Uncharacterized ABC transporter ATP-binding protein MT1318 1
Uncharacterized ABC transporter ATP-binding protein Mb1312c 1
Uncharacterized ABC transporter ATP-binding protein Rv1281c 1
Uncharacterized ABC transporter ATP-binding protein YejF 1

Protein length

Unique protein length 264

Protein length distribution