Orthogroup:group_197


Homologs in group_197

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20065 FBDBKF_20065 Morganella morganii S1 fimA type 1 fimbrial major subunit FimA
EHELCC_03465 EHELCC_03465 Morganella morganii S2 fimA type 1 fimbrial major subunit FimA
NLDBIP_03465 NLDBIP_03465 Morganella morganii S4 fimA type 1 fimbrial major subunit FimA
LHKJJB_09295 LHKJJB_09295 Morganella morganii S3 fimA type 1 fimbrial major subunit FimA
HKOGLL_09680 HKOGLL_09680 Morganella morganii S5 fimA type 1 fimbrial major subunit FimA
F4V73_RS01035 F4V73_RS01035 Morganella psychrotolerans - fimbrial protein
F4V73_RS01685 F4V73_RS01685 Morganella psychrotolerans fimA type 1 fimbrial major subunit FimA
PMI_RS17120 PMI_RS17120 Proteus mirabilis HI4320 fimA type 1 fimbrial major subunit FimA

Distribution of group_197 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_197 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_197

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_197.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimA 7
2 - 1

Product

# Product Occurence
1 type 1 fimbrial major subunit FimA 7
2 fimbrial protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 8 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 2 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -
K07352 6 type 1 fimbrial protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 8 Fimbrial protein

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG012278 1 Type-1 fimbrial protein, A chain precursor VF0221 Adherence
VFG042679 5 major fimbrial subunit VF1211 Adherence

Annotations of the 49 SwissProt hits

Annotation Number of occurrences
F17 fimbrial protein 1
F7-2 fimbrial protein 2
Fimbria A protein 1
Fimbrial protein 987P 1
Fimbrial subunit ElfA 1
Fimbrial subunit type 1 3
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 2
KS71A fimbrillin 1
Laminin-binding fimbrial subunit ElfA 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 6
Minor fimbrial subunit HifD 2
PRS fimbrial major pilin protein (Fragment) 1
Pap fimbrial major pilin protein 1
Probable fimbrial subunit LpfE 1
Probable major fimbrial subunit LpfA 1
Protein FimF 1
Protein LpfE 1
Putative fimbrin-like protein FimI 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmA 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YbgD 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeS 1
Uncharacterized fimbrial-like protein YgiL 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Min length 181
Max length 188
Mean length (sd) 182.1 (2.5)
Median length 181.0

Protein length distribution