K19056


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K19056, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K19056
KO K19056
Description AraC family transcriptional regulator, transposon Tn10 TetD protein

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K19056 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_419 PMI_RS19730 1237353 1238267 -1 helix-turn-helix domain-containing protein Proteus mirabilis HI4320
1 group_419 FBDBKF_18920 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
2 group_419 EHELCC_18665 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
3 group_419 NLDBIP_18640 24325 25263 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
4 group_419 LHKJJB_18535 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
5 group_419 HKOGLL_18270 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
6 group_419 F4V73_RS13825 399088 400026 1 helix-turn-helix domain-containing protein Morganella psychrotolerans