Homologs in group_49

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07255 FBDBKF_07255 75.7 Morganella morganii S1 ompC Porin OmpC
FBDBKF_09060 FBDBKF_09060 90.8 Morganella morganii S1 ompC Outer membrane porin OmpC/OmpF/PhoE
EHELCC_03715 EHELCC_03715 75.7 Morganella morganii S2 ompC Porin OmpC
EHELCC_10350 EHELCC_10350 90.8 Morganella morganii S2 ompC Outer membrane porin OmpC/OmpF/PhoE
NLDBIP_03715 NLDBIP_03715 75.7 Morganella morganii S4 ompC Porin OmpC
NLDBIP_10695 NLDBIP_10695 90.8 Morganella morganii S4 ompC Outer membrane porin OmpC/OmpF/PhoE
LHKJJB_09545 LHKJJB_09545 75.7 Morganella morganii S3 ompC Porin OmpC
LHKJJB_10660 LHKJJB_10660 90.8 Morganella morganii S3 ompC Outer membrane porin OmpC/OmpF/PhoE
HKOGLL_09430 HKOGLL_09430 75.7 Morganella morganii S5 ompC Porin OmpC
HKOGLL_13720 HKOGLL_13720 90.8 Morganella morganii S5 ompC Outer membrane porin OmpC/OmpF/PhoE
F4V73_RS01440 F4V73_RS01440 73.8 Morganella psychrotolerans - porin
PMI_RS00215 PMI_RS00215 32.2 Proteus mirabilis HI4320 - porin
PMI_RS03760 PMI_RS03760 68.7 Proteus mirabilis HI4320 - porin

Distribution of the homologs in the orthogroup group_49

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_49

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A1J0CL75 2.48e-174 493 65 7 389 1 None Outer membrane porin F Proteus mirabilis
Q56828 1.24e-159 456 61 9 388 3 ompF Outer membrane porin F Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG 1036 / NCIMB 9965 / AN6)
O33980 2.96e-141 409 57 8 395 3 ompF Outer membrane protein F Serratia marcescens
Q56111 4.35e-141 409 58 9 393 3 ompS2 Outer membrane protein S2 Salmonella typhi
P37592 6.03e-140 405 57 8 387 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZXQ1 6.03e-140 405 57 8 387 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain 14028s / SGSC 2262)
Q5PHY0 6.03e-140 405 57 8 387 3 ompD Outer membrane porin protein OmpD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57P83 6.03e-140 405 57 8 387 3 ompD Outer membrane porin protein OmpD Salmonella choleraesuis (strain SC-B67)
P0A263 4.13e-139 404 57 7 394 3 ompC Outer membrane porin C Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3NJI9 4.13e-139 404 57 7 394 1 ompC Outer membrane porin C Salmonella typhimurium (strain SL1344)
P0A264 4.13e-139 404 57 7 394 1 ompC Outer membrane porin C Salmonella typhi
A0A0H3NBQ0 3.13e-138 401 57 8 383 1 ompD Outer membrane porin OmpD Salmonella typhimurium (strain SL1344)
A8AGM8 3.5e-138 400 58 9 388 3 ompD Outer membrane porin protein OmpD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
P21420 2.42e-135 394 55 8 392 5 nmpC Putative outer membrane porin protein NmpC Escherichia coli (strain K12)
P07238 5.73e-135 393 55 8 392 3 LC Outer membrane porin protein LC Enterobacteria phage PA-2
P77747 6.07e-134 390 57 8 371 1 ompN Outer membrane porin N Escherichia coli (strain K12)
P06996 5.14e-133 388 57 7 384 1 ompC Outer membrane porin C Escherichia coli (strain K12)
Q8XE41 2.16e-131 384 56 8 387 3 ompC Outer membrane porin C Escherichia coli O157:H7
Q8CVW1 2.96e-131 384 56 8 393 1 ompC Outer membrane porin C Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q48473 5.44e-131 382 56 9 385 1 ompC Outer membrane porin C Klebsiella pneumoniae
Q56110 8.77e-131 383 58 9 390 3 ompS1 Outer membrane protein S1 Salmonella typhi
P0DQH0 9.72e-131 382 56 9 394 1 ompC Outer membrane porin C Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A0A0H3CMG2 1.56e-129 379 57 9 384 3 ompC Outer membrane porin C Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
A0A2S4MYF8 5.82e-128 375 55 8 395 1 ompC Outer membrane protein C Shigella flexneri
A0A4P7TKC8 5.82e-128 375 55 8 395 1 ompC1 Outer membrane porin C 1 Shigella flexneri serotype 5a (strain M90T)
Q47490 6.04e-127 372 52 8 385 2 phoE Outer membrane porin PhoE Enterobacter cloacae
P37432 4.19e-124 365 52 9 389 1 ompF Outer membrane porin F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3N9T8 4.19e-124 365 52 9 389 2 ompF Outer membrane porin F Salmonella typhimurium (strain SL1344)
Q56113 3.79e-123 363 52 8 388 1 ompF Outer membrane porin F Salmonella typhi
P02932 2.47e-122 360 52 9 386 1 phoE Outer membrane porin PhoE Escherichia coli (strain K12)
A0A4P7TME1 6.38e-122 360 52 8 390 1 ompC2 Outer membrane porin C 2 Shigella flexneri serotype 5a (strain M90T)
P30705 6.43e-122 359 52 10 386 2 phoE Outer membrane porin PhoE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q56119 1.93e-121 358 52 10 386 2 phoE Outer membrane porin PhoE Salmonella typhi
Q01605 2.68e-121 357 52 9 386 2 phoE Outer membrane porin PhoE Citrobacter freundii
Q54471 1.74e-118 351 51 10 395 3 ompC Outer membrane porin C Serratia marcescens
Q01606 9.71e-117 346 51 10 385 2 phoE Outer membrane porin PhoE Klebsiella oxytoca
P30704 2.91e-115 342 50 9 386 2 phoE Outer membrane porin PhoE Klebsiella pneumoniae
A0RZH5 1.25e-112 337 48 8 403 1 omp-EA Outer membrane protein Omp-EA Erwinia amylovora
J9RX10 8.53e-110 328 49 9 389 2 yedS Outer membrane protein YedS Escherichia coli
P0DSD9 9.16e-107 321 48 10 387 1 ompF Outer membrane porin F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
O33507 5.1e-106 318 51 8 360 3 ompC Outer membrane porin C (Fragment) Rahnella aquatilis
A0A4P7TN82 1.37e-105 318 48 10 387 1 ompF Outer membrane porin F Shigella flexneri serotype 5a (strain M90T)
P02931 1.37e-105 318 48 10 387 1 ompF Outer membrane porin F Escherichia coli (strain K12)
Q8K9I8 4.72e-82 258 39 10 386 3 BUsg_347 Porin-like protein BUsg_347 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57440 5.99e-78 248 38 8 397 3 BU359 Porin-like protein BU359 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P76335 2.75e-55 182 57 2 167 5 yedS Putative outer membrane protein YedS Escherichia coli (strain K12)
Q52581 4.15e-20 93 26 13 385 2 ompL Porin-like protein L Photobacterium profundum (strain SS9)
Q87LZ1 1.84e-19 91 26 15 401 3 ompU Outer membrane protein U Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P77519 6.67e-19 84 47 2 101 3 yddL Protein YddL Escherichia coli (strain K12)
Q8DBX0 3.86e-16 82 26 13 390 3 ompU Outer membrane protein U Vibrio vulnificus (strain CMCP6)
A5F934 8.53e-11 66 24 17 376 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6Q6 4.96e-10 63 24 17 375 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A9ZM27 1.57e-08 59 32 9 209 1 hopP Monosaccharide porin Halomonas sp.
E1V825 1.57e-08 59 32 9 209 1 hopP Major outer membrane protein Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10885
Feature type CDS
Gene -
Product porin
Location 316433 - 317587 (strand: 1)
Length 1155 (nucleotides) / 384 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_49
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00267 Gram-negative porin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3203 Cell wall/membrane/envelope biogenesis (M) M Outer membrane porin OmpC/OmpF/PhoE

Protein Sequence

MKKTLLAVLVPLVALSGAASAAEVYNKDGNKLDLYGKVDVRHLFSDNDNNGNAGSQDGDDSRFRIGIKGETQITDQLTGFGRFENEIKTNGTEGENDNKVRLAYAGLKFAEFGSLDYGRNYGVIYDTNAWTDVLPIFGNDTMTQTDVYMTGRAANLLTYRNTDFFGYVDGLSFALQYQGANDDNSIANRGEHDKINDTYSYDNTANGDGFGFSTAYDIGWGVSVGGAYSSSARPQGQKDNLASGALGDRAEAWNVGAKFDADNLYLAAVYGETRNMTHYGNNDSDAALTANKTQNIELVAQYQFDFGLRPSIAYLQSKGKSLNSGFGDDQDLVKYVDLGAYYYFNKNMSALIDYKINLLDESDFTRSAGINTDNVVGLGLVYQF

Flanking regions ( +/- flanking 50bp)

TTTATATCAATAAAGTCAGAGAGTAGTGGTTAATATAATAGGAATATAAAATGAAAAAGACATTATTAGCTGTATTAGTCCCGCTGGTTGCATTAAGCGGCGCTGCAAGCGCGGCAGAAGTTTATAACAAAGACGGCAATAAACTGGACCTGTACGGTAAAGTCGATGTTCGTCACTTATTCAGTGACAATGACAATAACGGTAATGCCGGCAGCCAGGACGGTGATGACTCCCGTTTCCGTATCGGTATCAAAGGTGAGACTCAAATCACTGACCAATTAACCGGTTTCGGTCGTTTCGAAAACGAAATTAAAACTAACGGCACTGAAGGCGAAAACGACAATAAAGTACGTTTAGCTTATGCAGGTCTGAAATTTGCTGAGTTCGGTTCACTGGACTACGGCCGTAACTACGGTGTTATTTATGACACCAACGCATGGACCGATGTTCTGCCAATCTTTGGTAACGATACCATGACGCAGACTGACGTTTACATGACAGGTCGTGCAGCAAACCTGCTGACTTACCGTAATACTGATTTCTTCGGTTACGTTGATGGTCTGAGCTTCGCATTACAGTATCAGGGTGCGAACGACGATAACTCTATCGCAAACCGTGGCGAACATGACAAAATTAATGATACCTACAGCTACGATAACACCGCTAATGGCGACGGTTTCGGTTTCTCCACAGCTTATGACATCGGCTGGGGCGTAAGCGTTGGTGGTGCATACTCAAGTTCTGCACGCCCACAGGGTCAGAAAGATAACCTGGCAAGTGGCGCGCTGGGCGACCGTGCAGAAGCATGGAACGTCGGTGCTAAATTTGACGCTGACAACCTGTACCTGGCAGCAGTTTACGGCGAAACCCGTAACATGACTCACTATGGTAACAACGACAGCGACGCGGCTTTAACTGCAAACAAAACTCAGAACATCGAGTTAGTGGCTCAGTATCAGTTCGACTTCGGTCTGCGTCCATCCATCGCTTACCTGCAATCTAAGGGTAAGAGCCTGAACAGTGGTTTCGGCGACGACCAGGACCTGGTTAAATATGTTGATTTAGGCGCGTACTACTATTTCAACAAAAACATGTCAGCGCTGATCGACTATAAAATTAACCTGTTAGACGAAAGCGACTTCACCCGCAGCGCCGGTATCAATACCGACAACGTGGTTGGCTTAGGTTTAGTTTACCAGTTCTGATTTTGTTTTAAGACAGAATTCAGACAGTATTCAGATAGTGAAAAAGGAGG