Homologs in group_49

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07255 FBDBKF_07255 81.6 Morganella morganii S1 ompC Porin OmpC
FBDBKF_09060 FBDBKF_09060 74.7 Morganella morganii S1 ompC Outer membrane porin OmpC/OmpF/PhoE
EHELCC_03715 EHELCC_03715 81.6 Morganella morganii S2 ompC Porin OmpC
EHELCC_10350 EHELCC_10350 74.7 Morganella morganii S2 ompC Outer membrane porin OmpC/OmpF/PhoE
NLDBIP_03715 NLDBIP_03715 81.6 Morganella morganii S4 ompC Porin OmpC
NLDBIP_10695 NLDBIP_10695 74.7 Morganella morganii S4 ompC Outer membrane porin OmpC/OmpF/PhoE
LHKJJB_09545 LHKJJB_09545 81.6 Morganella morganii S3 ompC Porin OmpC
LHKJJB_10660 LHKJJB_10660 74.7 Morganella morganii S3 ompC Outer membrane porin OmpC/OmpF/PhoE
HKOGLL_09430 HKOGLL_09430 81.6 Morganella morganii S5 ompC Porin OmpC
HKOGLL_13720 HKOGLL_13720 74.7 Morganella morganii S5 ompC Outer membrane porin OmpC/OmpF/PhoE
F4V73_RS10885 F4V73_RS10885 73.8 Morganella psychrotolerans - porin
PMI_RS00215 PMI_RS00215 31.4 Proteus mirabilis HI4320 - porin
PMI_RS03760 PMI_RS03760 72.5 Proteus mirabilis HI4320 - porin

Distribution of the homologs in the orthogroup group_49

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_49

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A1J0CL75 2.43e-176 497 70 8 372 1 None Outer membrane porin F Proteus mirabilis
Q56828 3.4e-170 481 67 5 369 3 ompF Outer membrane porin F Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG 1036 / NCIMB 9965 / AN6)
A8AGM8 2.43e-139 402 60 8 366 3 ompD Outer membrane porin protein OmpD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q47490 1.91e-137 397 56 6 360 2 phoE Outer membrane porin PhoE Enterobacter cloacae
O33980 1.3e-135 394 60 7 378 3 ompF Outer membrane protein F Serratia marcescens
P37592 1.64e-134 390 58 10 372 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZXQ1 1.64e-134 390 58 10 372 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain 14028s / SGSC 2262)
Q5PHY0 1.64e-134 390 58 10 372 3 ompD Outer membrane porin protein OmpD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57P83 1.64e-134 390 58 10 372 3 ompD Outer membrane porin protein OmpD Salmonella choleraesuis (strain SC-B67)
A0A0H3NBQ0 4.86e-133 387 58 10 368 1 ompD Outer membrane porin OmpD Salmonella typhimurium (strain SL1344)
P02932 1.86e-132 385 56 7 361 1 phoE Outer membrane porin PhoE Escherichia coli (strain K12)
Q01605 2.24e-131 382 56 7 361 2 phoE Outer membrane porin PhoE Citrobacter freundii
Q56111 9.1e-131 382 58 9 384 3 ompS2 Outer membrane protein S2 Salmonella typhi
Q01606 2.26e-130 379 55 6 360 2 phoE Outer membrane porin PhoE Klebsiella oxytoca
P0A263 3.66e-130 380 57 9 380 3 ompC Outer membrane porin C Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3NJI9 3.66e-130 380 57 9 380 1 ompC Outer membrane porin C Salmonella typhimurium (strain SL1344)
P0A264 3.66e-130 380 57 9 380 1 ompC Outer membrane porin C Salmonella typhi
P21420 1.15e-129 378 57 11 372 5 nmpC Putative outer membrane porin protein NmpC Escherichia coli (strain K12)
Q48473 2.11e-129 377 58 9 369 1 ompC Outer membrane porin C Klebsiella pneumoniae
P30705 3.07e-129 377 55 8 361 2 phoE Outer membrane porin PhoE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P07238 6.64e-129 376 56 11 372 3 LC Outer membrane porin protein LC Enterobacteria phage PA-2
Q56119 1.43e-128 375 55 8 361 2 phoE Outer membrane porin PhoE Salmonella typhi
P06996 6.43e-128 374 57 8 373 1 ompC Outer membrane porin C Escherichia coli (strain K12)
P30704 9.35e-128 373 54 7 361 2 phoE Outer membrane porin PhoE Klebsiella pneumoniae
Q56110 1.01e-127 374 57 9 395 3 ompS1 Outer membrane protein S1 Salmonella typhi
A0A0H3CMG2 8.48e-126 369 57 6 367 3 ompC Outer membrane porin C Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
P77747 1.23e-125 369 56 8 357 1 ompN Outer membrane porin N Escherichia coli (strain K12)
Q8XE41 5.31e-125 367 56 9 372 3 ompC Outer membrane porin C Escherichia coli O157:H7
P0DQH0 7.17e-125 367 55 10 382 1 ompC Outer membrane porin C Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q8CVW1 3.99e-122 359 55 11 383 1 ompC Outer membrane porin C Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A2S4MYF8 4.8e-122 359 55 10 378 1 ompC Outer membrane protein C Shigella flexneri
A0A4P7TKC8 4.8e-122 359 55 10 378 1 ompC1 Outer membrane porin C 1 Shigella flexneri serotype 5a (strain M90T)
A0A4P7TME1 6.74e-121 356 53 8 370 1 ompC2 Outer membrane porin C 2 Shigella flexneri serotype 5a (strain M90T)
Q54471 9.93e-121 356 53 9 378 3 ompC Outer membrane porin C Serratia marcescens
A0A4P7TN82 2.01e-119 352 54 8 370 1 ompF Outer membrane porin F Shigella flexneri serotype 5a (strain M90T)
P02931 2.01e-119 352 54 8 370 1 ompF Outer membrane porin F Escherichia coli (strain K12)
P0DSD9 6.12e-119 351 54 9 371 1 ompF Outer membrane porin F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
J9RX10 1.02e-118 350 53 9 368 2 yedS Outer membrane protein YedS Escherichia coli
P37432 1.32e-117 347 55 8 370 1 ompF Outer membrane porin F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3N9T8 1.32e-117 347 55 8 370 2 ompF Outer membrane porin F Salmonella typhimurium (strain SL1344)
Q56113 2.46e-117 347 55 8 370 1 ompF Outer membrane porin F Salmonella typhi
A0RZH5 4.52e-114 339 52 5 385 1 omp-EA Outer membrane protein Omp-EA Erwinia amylovora
O33507 2.97e-100 303 51 8 345 3 ompC Outer membrane porin C (Fragment) Rahnella aquatilis
Q8K9I8 1.07e-74 238 38 10 371 3 BUsg_347 Porin-like protein BUsg_347 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57440 2.17e-74 238 37 9 385 3 BU359 Porin-like protein BU359 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P76335 7.36e-60 193 61 2 162 5 yedS Putative outer membrane protein YedS Escherichia coli (strain K12)
Q52581 5e-22 98 29 19 372 2 ompL Porin-like protein L Photobacterium profundum (strain SS9)
P77519 6.68e-22 92 56 1 83 3 yddL Protein YddL Escherichia coli (strain K12)
Q87LZ1 6.52e-20 92 26 15 378 3 ompU Outer membrane protein U Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q8DBX0 3.68e-17 84 28 15 375 3 ompU Outer membrane protein U Vibrio vulnificus (strain CMCP6)
A5F934 3.97e-17 84 26 15 361 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6Q6 1.05e-16 83 26 15 361 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01440
Feature type CDS
Gene -
Product porin
Location 316919 - 317998 (strand: -1)
Length 1080 (nucleotides) / 359 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_49
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00267 Gram-negative porin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3203 Cell wall/membrane/envelope biogenesis (M) M Outer membrane porin OmpC/OmpF/PhoE

Protein Sequence

MKRNILAVVIPALLVAGAANAAEIYNKDGNKVDLYGKVDVRHMFADKDSGEDGDNSRVRFGIKGETQITDQLTGFGRFENEIKTNSTEGDNKNEVRLAYAGFKFAEFGSIDYGRNYGVIYDVNAWTDVMPLFGGDTMAQKDIYMTSRTADVLTYRNSDMFGYVDGLNFALQYQGANDDNSIAPRNNAKANGDGYGFSTTYDLGWGVSVGGAYANSARTIAQQAGIGGADGKRAEAWDFGAKYDANNVYLAAMYGETRNMTTFDSGSQIANKTKNIELVAQYQFDFGLRPSIGYNQSKGYDLNNGAYNSDLVKYVDLGAYYYFNKNMSAVVDYKINLLDSDNKAGVNDDNVVGLGLVYQF

Flanking regions ( +/- flanking 50bp)

TATTTATGGCAGTGGCAGGTGTCCGAATAACACCAATGAGGGTAATAATAATGAAACGCAATATTCTTGCAGTGGTTATCCCGGCTCTGTTAGTAGCTGGTGCAGCAAACGCTGCTGAAATCTACAACAAAGACGGCAACAAAGTAGATCTGTACGGTAAAGTTGACGTTCGTCACATGTTCGCTGATAAAGACAGCGGCGAAGATGGTGATAACTCACGCGTTCGTTTTGGTATCAAAGGTGAAACTCAGATCACTGACCAACTGACTGGTTTCGGTCGTTTTGAAAACGAAATCAAAACCAACAGCACCGAAGGCGACAACAAAAACGAAGTTCGTTTAGCTTACGCTGGTTTCAAATTTGCTGAGTTTGGTTCAATCGACTACGGCCGTAACTACGGCGTAATCTACGACGTCAACGCATGGACCGATGTTATGCCTCTGTTCGGTGGCGACACCATGGCACAGAAAGACATCTACATGACCAGCCGTACTGCTGACGTTCTGACTTATCGCAACAGCGACATGTTCGGTTACGTTGACGGCCTGAACTTTGCACTGCAATACCAGGGCGCTAACGACGACAATTCTATCGCTCCGCGTAACAACGCAAAAGCTAACGGCGACGGTTATGGTTTCTCCACTACTTATGACCTCGGCTGGGGCGTAAGCGTTGGTGGTGCGTATGCTAATTCAGCACGTACTATCGCACAGCAGGCTGGTATCGGCGGCGCTGATGGTAAGCGTGCTGAAGCATGGGATTTCGGTGCTAAATACGACGCTAACAACGTATACCTGGCAGCTATGTACGGTGAAACCCGTAACATGACTACTTTTGACAGCGGCTCACAAATCGCTAACAAAACCAAAAACATCGAATTAGTAGCACAGTACCAGTTCGACTTCGGTCTGCGTCCATCCATTGGCTATAACCAGTCTAAAGGTTATGACCTGAATAATGGTGCATACAATTCTGACCTGGTTAAATATGTTGATTTAGGTGCTTACTACTACTTCAACAAAAACATGTCTGCAGTTGTTGACTATAAAATCAACCTGCTGGACAGCGACAACAAAGCTGGCGTCAACGACGATAACGTTGTTGGTTTAGGTCTGGTTTACCAGTTCTAATTTAGCTTTACGTTGAATAGTGAAACCCATGGCTCTGCCATGGGTTTTTT