Orthogroup:group_49


Homologs in group_49

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14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07255 FBDBKF_07255 Morganella morganii S1 ompC Porin OmpC
FBDBKF_09060 FBDBKF_09060 Morganella morganii S1 ompC Outer membrane porin OmpC/OmpF/PhoE
EHELCC_03715 EHELCC_03715 Morganella morganii S2 ompC Porin OmpC
EHELCC_10350 EHELCC_10350 Morganella morganii S2 ompC Outer membrane porin OmpC/OmpF/PhoE
NLDBIP_03715 NLDBIP_03715 Morganella morganii S4 ompC Porin OmpC
NLDBIP_10695 NLDBIP_10695 Morganella morganii S4 ompC Outer membrane porin OmpC/OmpF/PhoE
LHKJJB_09545 LHKJJB_09545 Morganella morganii S3 ompC Porin OmpC
LHKJJB_10660 LHKJJB_10660 Morganella morganii S3 ompC Outer membrane porin OmpC/OmpF/PhoE
HKOGLL_09430 HKOGLL_09430 Morganella morganii S5 ompC Porin OmpC
HKOGLL_13720 HKOGLL_13720 Morganella morganii S5 ompC Outer membrane porin OmpC/OmpF/PhoE
F4V73_RS01440 F4V73_RS01440 Morganella psychrotolerans - porin
F4V73_RS10885 F4V73_RS10885 Morganella psychrotolerans - porin
PMI_RS00215 PMI_RS00215 Proteus mirabilis HI4320 - porin
PMI_RS03760 PMI_RS03760 Proteus mirabilis HI4320 - porin

Distribution of group_49 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_49 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_49

Orthogroup content: 14 members

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This page summarizes the annotation of all members of the orthologous group group_49.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ompC 10
2 - 4

Product

# Product Occurence
1 Porin OmpC 5
2 Outer membrane porin OmpC/OmpF/PhoE 5
3 porin 4

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3203 14 M Cell wall/membrane/envelope biogenesis (M) Outer membrane porin OmpC/OmpF/PhoE

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K09476 5 outer membrane pore protein F beta-Lactam resistance
Two-component system		 Multidrug resistance, repression of porin OmpF

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00267 14 Gram-negative porin

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG043568 5 phosphoporin PhoE VF0969 Adherence

Annotations of the 59 SwissProt hits

Annotation Number of occurrences
Major outer membrane protein 4
Monosaccharide porin 1
Outer membrane porin C 10
Outer membrane porin C (Fragment) 1
Outer membrane porin C 1 1
Outer membrane porin C 2 1
Outer membrane porin F 8
Outer membrane porin N 1
Outer membrane porin OmpD 1
Outer membrane porin PhoE 7
Outer membrane porin protein LC 1
Outer membrane porin protein OmpD 5
Outer membrane protein C 1
Outer membrane protein F 1
Outer membrane protein Omp-EA 1
Outer membrane protein P2 2
Outer membrane protein S1 1
Outer membrane protein S2 1
Outer membrane protein U 4
Outer membrane protein YedS 1
Porin-like protein BU359 1
Porin-like protein BUsg_347 1
Porin-like protein L 1
Protein YddL 1
Putative outer membrane porin protein NmpC 1
Putative outer membrane protein YedS 1

Protein length

Min length 359
Max length 396
Mean length (sd) 374.6 (10.3)
Median length 376.0

Protein length distribution