Homologs in group_49

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07255 FBDBKF_07255 71.2 Morganella morganii S1 ompC Porin OmpC
FBDBKF_09060 FBDBKF_09060 68.1 Morganella morganii S1 ompC Outer membrane porin OmpC/OmpF/PhoE
EHELCC_03715 EHELCC_03715 71.2 Morganella morganii S2 ompC Porin OmpC
EHELCC_10350 EHELCC_10350 68.1 Morganella morganii S2 ompC Outer membrane porin OmpC/OmpF/PhoE
NLDBIP_03715 NLDBIP_03715 71.2 Morganella morganii S4 ompC Porin OmpC
NLDBIP_10695 NLDBIP_10695 68.1 Morganella morganii S4 ompC Outer membrane porin OmpC/OmpF/PhoE
LHKJJB_09545 LHKJJB_09545 71.2 Morganella morganii S3 ompC Porin OmpC
LHKJJB_10660 LHKJJB_10660 68.1 Morganella morganii S3 ompC Outer membrane porin OmpC/OmpF/PhoE
HKOGLL_09430 HKOGLL_09430 71.2 Morganella morganii S5 ompC Porin OmpC
HKOGLL_13720 HKOGLL_13720 68.1 Morganella morganii S5 ompC Outer membrane porin OmpC/OmpF/PhoE
F4V73_RS01440 F4V73_RS01440 72.5 Morganella psychrotolerans - porin
F4V73_RS10885 F4V73_RS10885 68.7 Morganella psychrotolerans - porin
PMI_RS00215 PMI_RS00215 31.3 Proteus mirabilis HI4320 - porin

Distribution of the homologs in the orthogroup group_49

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_49

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A1J0CL75 0.0 750 100 0 371 1 None Outer membrane porin F Proteus mirabilis
Q56828 5.9e-167 474 65 6 379 3 ompF Outer membrane porin F Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG 1036 / NCIMB 9965 / AN6)
O33980 3.93e-139 403 58 7 387 3 ompF Outer membrane protein F Serratia marcescens
A8AGM8 6e-136 394 58 10 376 3 ompD Outer membrane porin protein OmpD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
P37592 2.98e-135 393 58 11 381 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZXQ1 2.98e-135 393 58 11 381 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain 14028s / SGSC 2262)
Q5PHY0 2.98e-135 393 58 11 381 3 ompD Outer membrane porin protein OmpD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57P83 2.98e-135 393 58 11 381 3 ompD Outer membrane porin protein OmpD Salmonella choleraesuis (strain SC-B67)
A0A0H3NBQ0 1.08e-133 389 58 11 377 1 ompD Outer membrane porin OmpD Salmonella typhimurium (strain SL1344)
P21420 1.42e-132 386 55 9 380 5 nmpC Putative outer membrane porin protein NmpC Escherichia coli (strain K12)
Q56111 4.09e-132 385 57 10 391 3 ompS2 Outer membrane protein S2 Salmonella typhi
P07238 2.17e-131 383 55 9 380 3 LC Outer membrane porin protein LC Enterobacteria phage PA-2
P77747 8.49e-130 380 56 9 362 1 ompN Outer membrane porin N Escherichia coli (strain K12)
Q56110 3.22e-129 379 57 9 383 3 ompS1 Outer membrane protein S1 Salmonella typhi
Q47490 7.61e-129 376 54 9 371 2 phoE Outer membrane porin PhoE Enterobacter cloacae
P0A263 2.46e-127 373 53 9 387 3 ompC Outer membrane porin C Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3NJI9 2.46e-127 373 53 9 387 1 ompC Outer membrane porin C Salmonella typhimurium (strain SL1344)
P0A264 2.46e-127 373 53 9 387 1 ompC Outer membrane porin C Salmonella typhi
A0A0H3CMG2 5.04e-127 372 54 6 375 3 ompC Outer membrane porin C Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
Q48473 2.94e-125 367 53 8 375 1 ompC Outer membrane porin C Klebsiella pneumoniae
A0A4P7TME1 5.08e-125 367 54 9 379 1 ompC2 Outer membrane porin C 2 Shigella flexneri serotype 5a (strain M90T)
P02932 2.82e-122 359 54 11 372 1 phoE Outer membrane porin PhoE Escherichia coli (strain K12)
P06996 1.33e-121 358 52 8 380 1 ompC Outer membrane porin C Escherichia coli (strain K12)
Q8XE41 5.3e-121 357 52 7 375 3 ompC Outer membrane porin C Escherichia coli O157:H7
Q8CVW1 1.23e-120 356 52 11 386 1 ompC Outer membrane porin C Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P37432 3.79e-120 355 54 12 381 1 ompF Outer membrane porin F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3N9T8 3.79e-120 355 54 12 381 2 ompF Outer membrane porin F Salmonella typhimurium (strain SL1344)
A0A2S4MYF8 3.99e-120 355 50 7 381 1 ompC Outer membrane protein C Shigella flexneri
A0A4P7TKC8 3.99e-120 355 50 7 381 1 ompC1 Outer membrane porin C 1 Shigella flexneri serotype 5a (strain M90T)
Q56113 5.2e-120 354 54 11 381 1 ompF Outer membrane porin F Salmonella typhi
P0DQH0 9.03e-120 354 51 10 385 1 ompC Outer membrane porin C Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q01605 1.11e-119 353 52 9 372 2 phoE Outer membrane porin PhoE Citrobacter freundii
P30705 4.41e-119 351 52 10 372 2 phoE Outer membrane porin PhoE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q56119 8.38e-119 350 52 10 372 2 phoE Outer membrane porin PhoE Salmonella typhi
J9RX10 3.47e-118 349 52 7 370 2 yedS Outer membrane protein YedS Escherichia coli
P30704 1.73e-116 345 51 9 372 2 phoE Outer membrane porin PhoE Klebsiella pneumoniae
Q01606 1.84e-116 345 52 9 371 2 phoE Outer membrane porin PhoE Klebsiella oxytoca
P0DSD9 1.19e-115 343 51 11 381 1 ompF Outer membrane porin F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A0A4P7TN82 4.5e-115 342 50 11 381 1 ompF Outer membrane porin F Shigella flexneri serotype 5a (strain M90T)
P02931 4.5e-115 342 50 11 381 1 ompF Outer membrane porin F Escherichia coli (strain K12)
Q54471 7.35e-109 326 48 10 383 3 ompC Outer membrane porin C Serratia marcescens
A0RZH5 3.83e-107 322 48 9 396 1 omp-EA Outer membrane protein Omp-EA Erwinia amylovora
O33507 3.5e-96 293 48 10 354 3 ompC Outer membrane porin C (Fragment) Rahnella aquatilis
Q8K9I8 1.58e-78 248 39 10 382 3 BUsg_347 Porin-like protein BUsg_347 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57440 4.07e-75 240 37 10 393 3 BU359 Porin-like protein BU359 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P76335 2.25e-55 182 56 3 165 5 yedS Putative outer membrane protein YedS Escherichia coli (strain K12)
P77519 1.88e-21 90 55 2 86 3 yddL Protein YddL Escherichia coli (strain K12)
Q52581 4.82e-18 87 25 15 381 2 ompL Porin-like protein L Photobacterium profundum (strain SS9)
Q87LZ1 2.61e-16 82 24 12 388 3 ompU Outer membrane protein U Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A5F934 1.84e-12 71 24 15 365 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6Q6 1.14e-11 68 24 15 365 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8DBX0 7.32e-11 66 22 10 382 3 ompU Outer membrane protein U Vibrio vulnificus (strain CMCP6)
A9ZM27 0.000673 45 30 9 205 1 hopP Monosaccharide porin Halomonas sp.
E1V825 0.000673 45 30 9 205 1 hopP Major outer membrane protein Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03760
Feature type CDS
Gene -
Product porin
Location 848725 - 849840 (strand: -1)
Length 1116 (nucleotides) / 371 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_49
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00267 Gram-negative porin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3203 Cell wall/membrane/envelope biogenesis (M) M Outer membrane porin OmpC/OmpF/PhoE

Protein Sequence

MMKRNILAVVIPALMFAGAANAAEMYNKDGNKVDIYGKVDVRHYFADADTKGDHESGDASRARIGFKGETQINKDLTGFGRFEYEVKTNTTEGENKAKTRLAYAGLKFADFGSLDYGRNYGVIYDTNAWTDVLPLWGGDSMAQTDVYMTSRTTGVLTYRNTDMFGYVDGLSFALQYQGKNNENTNNKRKDNAEANGDGFGFSTAYNLGWGVTLGGGYSSSARTNWQEHKSDATGKRAEAWNVGGKFEANNVYLAAMYGETRNMNYYGDGAIANKTQNIELTAQYDFADLGIKPSLGYVQSKGKDLNNGVGGLKDNNHDLVKYISVGSFYKFNKNMTAVVDYKINLLDEDDFTKANGVATDNVVGLGLTYQF

Flanking regions ( +/- flanking 50bp)

TTTCTGGCAGTGGCAAAGGTGTCTGAATAACACCAATGAGGGTAATAATAATGATGAAGCGCAATATTCTTGCAGTGGTAATCCCAGCTTTAATGTTTGCTGGTGCAGCAAACGCAGCTGAAATGTACAACAAAGACGGCAACAAAGTAGATATCTACGGTAAAGTTGACGTTCGTCATTACTTCGCTGATGCTGATACTAAAGGCGATCATGAAAGCGGTGACGCTTCTCGTGCACGTATCGGTTTCAAAGGCGAAACTCAAATCAATAAAGATTTAACTGGTTTCGGTCGTTTTGAATACGAAGTTAAAACAAACACTACTGAAGGCGAGAACAAAGCTAAAACTCGTCTAGCATATGCTGGTCTGAAATTTGCTGACTTCGGTTCTTTAGATTACGGTCGTAACTACGGTGTAATTTATGACACCAACGCATGGACTGACGTTCTGCCTTTATGGGGTGGTGACTCCATGGCGCAAACTGACGTTTATATGACTAGCCGTACTACTGGCGTATTAACTTACCGTAACACCGATATGTTCGGTTATGTTGATGGTTTAAGCTTTGCTCTGCAATATCAAGGCAAAAATAACGAAAACACCAACAATAAACGTAAAGACAACGCTGAAGCAAATGGCGACGGTTTTGGTTTCTCTACAGCTTATAACTTAGGCTGGGGCGTAACACTGGGTGGTGGTTACTCAAGTTCTGCTCGTACTAACTGGCAAGAACATAAGAGTGATGCTACTGGTAAACGTGCTGAAGCATGGAACGTTGGTGGTAAATTCGAAGCTAACAATGTTTACTTAGCAGCAATGTACGGTGAAACCCGTAACATGAACTACTATGGTGACGGTGCAATTGCAAACAAAACTCAAAATATCGAGTTAACTGCACAGTATGACTTTGCTGATTTAGGTATCAAACCATCTTTAGGTTATGTTCAATCTAAAGGTAAAGATCTGAATAATGGTGTTGGCGGTCTGAAAGACAACAACCATGATTTAGTTAAATATATCTCTGTAGGTTCTTTCTACAAATTTAACAAAAACATGACTGCAGTTGTTGATTACAAAATCAACCTGTTAGATGAAGATGACTTCACTAAAGCTAACGGCGTTGCAACTGACAACGTAGTTGGTTTAGGTCTGACTTATCAGTTCTAATTACCCTTTAAGGTAATTAAACAGTCAAGTTAATTGATTTGAAAAGCAAC