Homologs in group_30

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07255 FBDBKF_07255 76.2 Morganella morganii S1 ompC Porin OmpC
FBDBKF_09060 FBDBKF_09060 100.0 Morganella morganii S1 ompC Outer membrane porin OmpC/OmpF/PhoE
EHELCC_03715 EHELCC_03715 76.2 Morganella morganii S2 ompC Porin OmpC
NLDBIP_03715 NLDBIP_03715 76.2 Morganella morganii S4 ompC Porin OmpC
NLDBIP_10695 NLDBIP_10695 100.0 Morganella morganii S4 ompC Outer membrane porin OmpC/OmpF/PhoE
LHKJJB_09545 LHKJJB_09545 76.2 Morganella morganii S3 ompC Porin OmpC
LHKJJB_10660 LHKJJB_10660 100.0 Morganella morganii S3 ompC Outer membrane porin OmpC/OmpF/PhoE
HKOGLL_09430 HKOGLL_09430 76.2 Morganella morganii S5 ompC Porin OmpC
HKOGLL_13720 HKOGLL_13720 100.0 Morganella morganii S5 ompC Outer membrane porin OmpC/OmpF/PhoE
F4V73_RS01440 F4V73_RS01440 74.7 Morganella psychrotolerans - porin
F4V73_RS10885 F4V73_RS10885 90.8 Morganella psychrotolerans - porin
PMI_RS00215 PMI_RS00215 32.4 Proteus mirabilis HI4320 - porin
PMI_RS03760 PMI_RS03760 68.1 Proteus mirabilis HI4320 - porin

Distribution of the homologs in the orthogroup group_30

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_30

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A1J0CL75 9.69e-176 496 65 6 386 1 None Outer membrane porin F Proteus mirabilis
Q56828 1.26e-156 448 62 8 385 3 ompF Outer membrane porin F Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG 1036 / NCIMB 9965 / AN6)
O33980 1.75e-140 407 58 8 392 3 ompF Outer membrane protein F Serratia marcescens
P37592 9.22e-140 405 58 9 384 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZXQ1 9.22e-140 405 58 9 384 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain 14028s / SGSC 2262)
Q5PHY0 9.22e-140 405 58 9 384 3 ompD Outer membrane porin protein OmpD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57P83 9.22e-140 405 58 9 384 3 ompD Outer membrane porin protein OmpD Salmonella choleraesuis (strain SC-B67)
A8AGM8 1.63e-139 404 59 10 385 3 ompD Outer membrane porin protein OmpD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A0A0H3NBQ0 3.06e-138 401 58 9 380 1 ompD Outer membrane porin OmpD Salmonella typhimurium (strain SL1344)
P0A263 3.78e-138 401 58 9 391 3 ompC Outer membrane porin C Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3NJI9 3.78e-138 401 58 9 391 1 ompC Outer membrane porin C Salmonella typhimurium (strain SL1344)
P0A264 3.78e-138 401 58 9 391 1 ompC Outer membrane porin C Salmonella typhi
P21420 6.61e-138 400 57 9 389 5 nmpC Putative outer membrane porin protein NmpC Escherichia coli (strain K12)
Q56111 1.06e-137 400 57 8 390 3 ompS2 Outer membrane protein S2 Salmonella typhi
P07238 1.5e-137 399 57 9 389 3 LC Outer membrane porin protein LC Enterobacteria phage PA-2
P06996 8.98e-135 392 57 8 384 1 ompC Outer membrane porin C Escherichia coli (strain K12)
P77747 1.34e-133 390 57 7 368 1 ompN Outer membrane porin N Escherichia coli (strain K12)
Q48473 4.58e-133 388 58 11 383 1 ompC Outer membrane porin C Klebsiella pneumoniae
P0DQH0 3.46e-132 386 56 9 390 1 ompC Outer membrane porin C Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q56110 9.82e-132 385 59 9 385 3 ompS1 Outer membrane protein S1 Salmonella typhi
Q8XE41 2.12e-131 384 57 9 385 3 ompC Outer membrane porin C Escherichia coli O157:H7
Q8CVW1 6.35e-131 383 56 8 389 1 ompC Outer membrane porin C Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A2S4MYF8 2.7e-130 381 55 9 392 1 ompC Outer membrane protein C Shigella flexneri
A0A4P7TKC8 2.7e-130 381 55 9 392 1 ompC1 Outer membrane porin C 1 Shigella flexneri serotype 5a (strain M90T)
A0A0H3CMG2 8.21e-130 379 57 8 384 3 ompC Outer membrane porin C Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
Q47490 2.31e-125 368 53 9 382 2 phoE Outer membrane porin PhoE Enterobacter cloacae
P37432 3.4e-123 363 54 9 386 1 ompF Outer membrane porin F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3N9T8 3.4e-123 363 54 9 386 2 ompF Outer membrane porin F Salmonella typhimurium (strain SL1344)
Q56113 4.98e-123 362 54 9 386 1 ompF Outer membrane porin F Salmonella typhi
P02932 4.26e-122 359 52 8 383 1 phoE Outer membrane porin PhoE Escherichia coli (strain K12)
A0A4P7TME1 9.46e-122 359 52 9 388 1 ompC2 Outer membrane porin C 2 Shigella flexneri serotype 5a (strain M90T)
P30705 2.14e-121 358 52 9 383 2 phoE Outer membrane porin PhoE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q01605 5.95e-121 357 51 8 383 2 phoE Outer membrane porin PhoE Citrobacter freundii
Q56119 1.13e-120 356 52 9 383 2 phoE Outer membrane porin PhoE Salmonella typhi
Q54471 5.43e-119 352 51 10 393 3 ompC Outer membrane porin C Serratia marcescens
Q01606 2.41e-116 345 51 8 382 2 phoE Outer membrane porin PhoE Klebsiella oxytoca
P30704 5.02e-115 342 50 8 383 2 phoE Outer membrane porin PhoE Klebsiella pneumoniae
J9RX10 1.64e-113 338 50 8 384 2 yedS Outer membrane protein YedS Escherichia coli
A0RZH5 4.03e-111 333 50 9 400 1 omp-EA Outer membrane protein Omp-EA Erwinia amylovora
P0DSD9 5.89e-107 321 49 10 387 1 ompF Outer membrane porin F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
O33507 7.98e-107 320 51 6 357 3 ompC Outer membrane porin C (Fragment) Rahnella aquatilis
A0A4P7TN82 1.15e-105 318 49 10 387 1 ompF Outer membrane porin F Shigella flexneri serotype 5a (strain M90T)
P02931 1.15e-105 318 49 10 387 1 ompF Outer membrane porin F Escherichia coli (strain K12)
Q8K9I8 1.25e-79 251 40 11 385 3 BUsg_347 Porin-like protein BUsg_347 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57440 4.36e-75 240 37 8 395 3 BU359 Porin-like protein BU359 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P76335 6.83e-56 183 58 2 165 5 yedS Putative outer membrane protein YedS Escherichia coli (strain K12)
Q87LZ1 2.27e-21 97 27 16 398 3 ompU Outer membrane protein U Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q8DBX0 1.4e-20 95 29 16 391 3 ompU Outer membrane protein U Vibrio vulnificus (strain CMCP6)
Q52581 5.96e-20 93 26 15 384 2 ompL Porin-like protein L Photobacterium profundum (strain SS9)
P77519 5.08e-18 81 46 2 99 3 yddL Protein YddL Escherichia coli (strain K12)
A5F934 2.43e-11 67 24 16 374 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6Q6 3.09e-10 64 24 15 373 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A9ZM27 8.68e-08 57 31 10 211 1 hopP Monosaccharide porin Halomonas sp.
E1V825 8.68e-08 57 31 10 211 1 hopP Major outer membrane protein Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_10350
Feature type CDS
Gene ompC
Product Outer membrane porin OmpC/OmpF/PhoE
Location 117742 - 118887 (strand: 1)
Length 1146 (nucleotides) / 381 (amino acids)
In genomic island -

Contig

Accession ZDB_219
Length 213167 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_30
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00267 Gram-negative porin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3203 Cell wall/membrane/envelope biogenesis (M) M Outer membrane porin OmpC/OmpF/PhoE

Protein Sequence

MKKTLLAVLVPLVALSGAANAAEIYNKDGNKLDLYGKVDVRHLFSDNDHYGDSQNGDDSRFRIGIKGETQITDQLTGFGRFENEIKTNGTEGDNKNKVRLAYAGLKFAEFGSLDYGRNYGVIYDTNAWTDVLPIFGNDTMTQTDVYMTGRAANLLTYRNSDFFGYVDGLSFALQYQGANDDNSISSRGTSDFRDPTSYDNTANGDGFGFSTAYDIGWGVSVGGAYSSSARPDGQKYNQASGALGDRAEAWNFGAKYDANNLYLAAVYGETRNMTHYGTNDDNRGLTANKTQNIELVAQYQFDFGLRPSIAYLQSKGKSLSGGYGDDQDLVKYVDLGAYYYFNKNMSALIDYKINLLDENDFTRGSGINTDNVLGLGLVYQF

Flanking regions ( +/- flanking 50bp)

TCTGTGTAAATAGGGTCAGAGAGTAGTGGTTAATATAATAGGAATATAAAATGAAAAAGACATTATTAGCTGTATTAGTCCCGCTCGTTGCATTAAGCGGCGCTGCAAACGCGGCAGAGATTTATAACAAAGACGGTAATAAACTGGATCTGTACGGTAAAGTCGATGTTCGTCATTTATTCAGCGACAATGACCACTATGGTGACAGCCAGAACGGTGATGACTCCCGTTTCCGTATCGGTATCAAAGGTGAAACCCAGATCACTGATCAATTAACCGGCTTTGGTCGTTTCGAAAACGAAATCAAAACCAACGGTACTGAAGGCGACAACAAAAACAAAGTTCGTTTAGCCTACGCTGGTCTGAAATTTGCTGAGTTCGGTTCACTGGACTACGGCCGTAACTACGGTGTTATCTATGACACCAACGCATGGACCGATGTGCTGCCAATCTTCGGTAACGACACCATGACTCAGACCGACGTCTACATGACCGGTCGTGCTGCAAACCTGCTGACTTACCGTAACTCTGATTTCTTCGGTTACGTTGACGGCCTGAGCTTCGCATTACAGTATCAGGGCGCGAACGACGATAACTCTATCTCAAGCCGTGGTACCAGCGATTTCCGTGACCCGACCAGCTATGATAACACTGCTAACGGCGACGGTTTCGGTTTCTCCACCGCGTATGACATCGGCTGGGGTGTGAGTGTTGGTGGTGCGTACTCAAGCTCCGCACGTCCTGACGGTCAGAAATACAACCAGGCAAGCGGCGCTCTGGGTGACCGTGCAGAAGCATGGAACTTCGGTGCTAAATACGACGCTAACAACCTGTACCTGGCAGCAGTTTACGGCGAAACCCGTAACATGACTCACTACGGTACTAACGACGACAACCGTGGCTTAACTGCTAACAAAACTCAGAACATCGAGTTAGTGGCTCAGTATCAGTTCGATTTCGGTCTGCGTCCGTCCATCGCTTACCTGCAGTCTAAAGGTAAGAGCCTGAGCGGCGGTTACGGCGACGACCAGGACCTGGTTAAATATGTTGATTTAGGTGCGTACTACTACTTCAACAAAAACATGTCTGCTCTGATCGACTACAAAATTAACCTGTTAGACGAAAACGACTTCACCCGTGGTTCCGGTATCAATACCGACAACGTACTGGGCTTAGGTTTAGTTTACCAGTTCTGATTTAATTCAGAGAACGTATAATGAAAAAGGAGGCGAAAGCCTCCTTTTTT