Homologs in group_49

Help

13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09060 FBDBKF_09060 76.2 Morganella morganii S1 ompC Outer membrane porin OmpC/OmpF/PhoE
EHELCC_03715 EHELCC_03715 100.0 Morganella morganii S2 ompC Porin OmpC
EHELCC_10350 EHELCC_10350 76.2 Morganella morganii S2 ompC Outer membrane porin OmpC/OmpF/PhoE
NLDBIP_03715 NLDBIP_03715 100.0 Morganella morganii S4 ompC Porin OmpC
NLDBIP_10695 NLDBIP_10695 76.2 Morganella morganii S4 ompC Outer membrane porin OmpC/OmpF/PhoE
LHKJJB_09545 LHKJJB_09545 100.0 Morganella morganii S3 ompC Porin OmpC
LHKJJB_10660 LHKJJB_10660 76.2 Morganella morganii S3 ompC Outer membrane porin OmpC/OmpF/PhoE
HKOGLL_09430 HKOGLL_09430 100.0 Morganella morganii S5 ompC Porin OmpC
HKOGLL_13720 HKOGLL_13720 76.2 Morganella morganii S5 ompC Outer membrane porin OmpC/OmpF/PhoE
F4V73_RS01440 F4V73_RS01440 81.6 Morganella psychrotolerans - porin
F4V73_RS10885 F4V73_RS10885 75.7 Morganella psychrotolerans - porin
PMI_RS00215 PMI_RS00215 29.4 Proteus mirabilis HI4320 - porin
PMI_RS03760 PMI_RS03760 71.2 Proteus mirabilis HI4320 - porin

Distribution of the homologs in the orthogroup group_49

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_49

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A1J0CL75 0.0 512 70 5 372 1 None Outer membrane porin F Proteus mirabilis
Q56828 9.15e-168 475 66 6 375 3 ompF Outer membrane porin F Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 / CCUG 14189 / LMG 1036 / NCIMB 9965 / AN6)
A8AGM8 6.08e-152 435 63 9 371 3 ompD Outer membrane porin protein OmpD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
P37592 9.44e-151 432 63 11 376 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D0ZXQ1 9.44e-151 432 63 11 376 1 ompD Outer membrane porin protein OmpD Salmonella typhimurium (strain 14028s / SGSC 2262)
Q5PHY0 9.44e-151 432 63 11 376 3 ompD Outer membrane porin protein OmpD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57P83 9.44e-151 432 63 11 376 3 ompD Outer membrane porin protein OmpD Salmonella choleraesuis (strain SC-B67)
A0A0H3NBQ0 3.69e-149 429 63 11 372 1 ompD Outer membrane porin OmpD Salmonella typhimurium (strain SL1344)
O33980 3.32e-145 418 61 6 381 3 ompF Outer membrane protein F Serratia marcescens
P0A263 5.26e-139 403 58 8 384 3 ompC Outer membrane porin C Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3NJI9 5.26e-139 403 58 8 384 1 ompC Outer membrane porin C Salmonella typhimurium (strain SL1344)
P0A264 5.26e-139 403 58 8 384 1 ompC Outer membrane porin C Salmonella typhi
P07238 9.61e-139 402 58 9 375 3 LC Outer membrane porin protein LC Enterobacteria phage PA-2
P21420 2.86e-138 400 58 9 375 5 nmpC Putative outer membrane porin protein NmpC Escherichia coli (strain K12)
Q48473 4.01e-136 395 57 7 372 1 ompC Outer membrane porin C Klebsiella pneumoniae
P06996 9.75e-135 392 57 6 375 1 ompC Outer membrane porin C Escherichia coli (strain K12)
A0A0H3CMG2 1.17e-134 391 57 6 371 3 ompC Outer membrane porin C Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
Q8XE41 1.96e-134 391 58 8 374 3 ompC Outer membrane porin C Escherichia coli O157:H7
Q56111 6.77e-133 387 58 10 388 3 ompS2 Outer membrane protein S2 Salmonella typhi
Q47490 1.03e-132 386 55 7 367 2 phoE Outer membrane porin PhoE Enterobacter cloacae
P0DQH0 1.1e-132 387 57 9 385 1 ompC Outer membrane porin C Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q8CVW1 2.02e-132 386 57 8 383 1 ompC Outer membrane porin C Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A4P7TME1 1.61e-131 383 55 8 374 1 ompC2 Outer membrane porin C 2 Shigella flexneri serotype 5a (strain M90T)
Q56110 2.5e-131 384 58 8 398 3 ompS1 Outer membrane protein S1 Salmonella typhi
A0A2S4MYF8 4.51e-131 382 57 9 380 1 ompC Outer membrane protein C Shigella flexneri
A0A4P7TKC8 4.51e-131 382 57 9 380 1 ompC1 Outer membrane porin C 1 Shigella flexneri serotype 5a (strain M90T)
P02932 5.89e-131 381 56 9 368 1 phoE Outer membrane porin PhoE Escherichia coli (strain K12)
P77747 1.3e-128 376 57 9 360 1 ompN Outer membrane porin N Escherichia coli (strain K12)
P30705 1.93e-126 370 55 10 368 2 phoE Outer membrane porin PhoE Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q01606 3.11e-126 369 54 7 367 2 phoE Outer membrane porin PhoE Klebsiella oxytoca
Q56119 8.87e-126 368 55 10 368 2 phoE Outer membrane porin PhoE Salmonella typhi
Q54471 1.38e-125 369 53 9 382 3 ompC Outer membrane porin C Serratia marcescens
Q01605 4.13e-125 367 54 8 368 2 phoE Outer membrane porin PhoE Citrobacter freundii
P30704 2.12e-124 365 54 8 368 2 phoE Outer membrane porin PhoE Klebsiella pneumoniae
J9RX10 4.63e-124 364 55 10 371 2 yedS Outer membrane protein YedS Escherichia coli
Q56113 8.35e-123 361 56 11 376 1 ompF Outer membrane porin F Salmonella typhi
P37432 1.2e-122 361 56 11 376 1 ompF Outer membrane porin F Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0H3N9T8 1.2e-122 361 56 11 376 2 ompF Outer membrane porin F Salmonella typhimurium (strain SL1344)
P0DSD9 4.22e-116 344 55 13 378 1 ompF Outer membrane porin F Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A0A4P7TN82 2.31e-115 342 55 13 378 1 ompF Outer membrane porin F Shigella flexneri serotype 5a (strain M90T)
P02931 2.31e-115 342 55 13 378 1 ompF Outer membrane porin F Escherichia coli (strain K12)
A0RZH5 2.14e-110 330 50 9 392 1 omp-EA Outer membrane protein Omp-EA Erwinia amylovora
O33507 1.08e-104 314 51 8 350 3 ompC Outer membrane porin C (Fragment) Rahnella aquatilis
Q8K9I8 1.55e-83 261 41 10 373 3 BUsg_347 Porin-like protein BUsg_347 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57440 7.07e-74 237 36 9 385 3 BU359 Porin-like protein BU359 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P76335 4.26e-59 191 62 3 165 5 yedS Putative outer membrane protein YedS Escherichia coli (strain K12)
Q52581 6.01e-23 101 28 16 378 2 ompL Porin-like protein L Photobacterium profundum (strain SS9)
Q87LZ1 1.37e-22 100 27 13 385 3 ompU Outer membrane protein U Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P77519 7.08e-21 89 51 3 99 3 yddL Protein YddL Escherichia coli (strain K12)
Q8DBX0 1.53e-14 77 26 15 383 3 ompU Outer membrane protein U Vibrio vulnificus (strain CMCP6)
A5F934 9.49e-13 72 26 17 363 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6Q6 2.31e-12 70 26 17 363 1 ompU Outer membrane protein U Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_07255
Feature type CDS
Gene ompC
Product Porin OmpC
Location 128861 - 129961 (strand: -1)
Length 1101 (nucleotides) / 366 (amino acids)

Contig

Accession contig_7
Length 171383 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_49
Orthogroup size 14
N. genomes 7

Actions

Genomic region

Domains

PF00267 Gram-negative porin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3203 Cell wall/membrane/envelope biogenesis (M) M Outer membrane porin OmpC/OmpF/PhoE

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09476 outer membrane pore protein F beta-Lactam resistance
Two-component system		 Multidrug resistance, repression of porin OmpF

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG043568 phosphoporin PhoE VF0969 Adherence

Protein Sequence

MKRNILAVVIPALLVAGAANAAEIYNKDGNKVDLYGKVDVRHMFAKSDDNGSKEDGDDSRVRFGIKGETQITDQLTGFGRFENEIKTNGVEGDNKNKVRLAYAGFKFAEFGSIDYGRNYGVVYDTAAWTDVLPLFGGDTMAQTDVFMTGRNANLLTYRNTDMFGYVDGLNFALQYQGANDDNSIAARDSAKANGDGYGLSSSYDLGWGVTLGAGYSNSARTINQQKGMFGAEGKRAEAWNVGAKYDANNLYLAALYGETRNMTKYGEADDIANKTQNFELVAQYQFDFGLRPSIAYLQSKGKDLDNGSKGSEDLVKYIDLGAYYYFNKNMSAVVDYKINLLDNNDFTRGAKINTGDVVGLGLTYQF

Flanking regions ( +/- flanking 50bp)

TATTTCTGGCAGTGGCAGGTGTCCGAATAACACCAATGAGGGTAATAATAATGAAACGCAATATTCTTGCAGTGGTTATCCCGGCTCTGTTAGTTGCTGGTGCAGCAAACGCAGCTGAAATCTACAACAAAGACGGCAACAAAGTAGACCTGTACGGTAAAGTTGACGTTCGTCACATGTTCGCTAAGTCTGATGACAATGGCTCTAAAGAAGATGGCGACGATTCACGCGTTCGTTTCGGCATCAAAGGTGAAACTCAGATCACTGACCAACTGACCGGTTTCGGTCGTTTCGAAAACGAAATCAAAACCAACGGCGTTGAAGGCGACAACAAAAACAAAGTACGTTTAGCTTACGCTGGTTTCAAATTCGCTGAATTCGGTTCAATCGACTACGGCCGTAACTACGGTGTGGTATATGACACTGCAGCATGGACCGACGTTCTGCCACTGTTCGGTGGCGACACCATGGCACAGACCGACGTATTCATGACCGGTCGTAATGCTAACCTGCTGACCTACCGTAACACCGACATGTTCGGTTACGTTGATGGTCTGAACTTCGCTCTGCAGTATCAGGGTGCTAACGACGATAACTCTATCGCAGCACGTGACAGCGCTAAAGCGAATGGTGACGGTTACGGTTTATCATCTTCTTACGACCTGGGCTGGGGCGTGACTCTGGGTGCTGGCTACTCTAACTCTGCTCGTACTATCAACCAGCAGAAAGGTATGTTCGGTGCTGAAGGTAAACGTGCTGAAGCATGGAACGTTGGTGCTAAATACGACGCTAACAACCTGTACCTGGCCGCTCTGTACGGTGAAACCCGTAACATGACCAAATACGGCGAAGCTGATGACATCGCTAACAAAACTCAGAACTTCGAATTAGTAGCACAGTACCAGTTCGACTTCGGTCTGCGTCCATCCATCGCTTACCTGCAGTCTAAAGGTAAAGACCTGGATAACGGTAGCAAAGGCAGCGAAGACCTGGTTAAATACATCGACCTGGGTGCTTACTACTACTTCAACAAAAACATGTCTGCAGTTGTTGATTATAAAATCAACCTGCTGGACAACAATGACTTCACCCGCGGTGCTAAAATCAACACTGGTGATGTTGTTGGTTTAGGTCTGACTTACCAGTTCTGATTTAGCTTTAACGCTAAGTATGAATACAAAACCCACGGCTTGCCGTGGGT