Homologs in group_589

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01720 FBDBKF_01720 100.0 Morganella morganii S1 hemB porphobilinogen synthase
NLDBIP_01270 NLDBIP_01270 100.0 Morganella morganii S4 hemB porphobilinogen synthase
LHKJJB_00765 LHKJJB_00765 100.0 Morganella morganii S3 hemB porphobilinogen synthase
HKOGLL_00805 HKOGLL_00805 100.0 Morganella morganii S5 hemB porphobilinogen synthase
F4V73_RS04050 F4V73_RS04050 97.2 Morganella psychrotolerans hemB porphobilinogen synthase
PMI_RS07040 PMI_RS07040 82.0 Proteus mirabilis HI4320 hemB porphobilinogen synthase

Distribution of the homologs in the orthogroup group_589

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_589

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACB3 0.0 509 78 0 319 3 hemB Delta-aminolevulinic acid dehydratase Shigella flexneri
P0ACB2 0.0 509 78 0 319 1 hemB Delta-aminolevulinic acid dehydratase Escherichia coli (strain K12)
O67876 2.02e-110 327 52 1 300 3 hemB Delta-aminolevulinic acid dehydratase Aquifex aeolicus (strain VF5)
Q9ZMR8 8.65e-109 322 50 2 317 3 hemB Delta-aminolevulinic acid dehydratase Helicobacter pylori (strain J99 / ATCC 700824)
P30950 2.16e-108 321 51 1 315 3 hemB Delta-aminolevulinic acid dehydratase Bacillus subtilis (strain 168)
Q9K8G2 5.78e-108 320 51 1 315 3 hemB Delta-aminolevulinic acid dehydratase Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P56074 1.01e-106 317 49 2 316 3 hemB Delta-aminolevulinic acid dehydratase Helicobacter pylori (strain ATCC 700392 / 26695)
O28305 5.49e-106 315 51 3 315 3 hemB Delta-aminolevulinic acid dehydratase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P64335 8.67e-103 307 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus (strain MW2)
Q6G8Q7 8.67e-103 307 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus (strain MSSA476)
Q6GG37 8.67e-103 307 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus (strain MRSA252)
P64334 8.67e-103 307 49 2 311 1 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus (strain N315)
P64333 8.67e-103 307 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFA4 8.67e-103 307 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus (strain COL)
Q2FXR3 8.67e-103 307 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus (strain NCTC 8325 / PS 47)
P0C1R9 3.79e-101 303 49 2 309 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus aureus
Q8CNZ0 1.86e-100 301 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNN5 1.86e-100 301 49 2 311 3 hemB Delta-aminolevulinic acid dehydratase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P43087 1.07e-99 299 49 2 314 3 hemB Delta-aminolevulinic acid dehydratase Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
O26839 1.06e-97 294 49 4 320 3 hemB Delta-aminolevulinic acid dehydratase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q60178 5.01e-97 293 48 3 317 3 hemB Delta-aminolevulinic acid dehydratase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P77923 3.33e-96 291 47 1 315 3 hemB Delta-aminolevulinic acid dehydratase Propionibacterium freudenreichii subsp. freudenreichii
Q02250 2.22e-95 288 45 3 320 3 hemB Delta-aminolevulinic acid dehydratase Methanothermus sociabilis
P77969 1.16e-93 284 49 2 313 3 hemB Delta-aminolevulinic acid dehydratase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q5Z8V9 2.03e-90 279 47 6 314 2 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic Oryza sativa subsp. japonica
Q9SFH9 6.89e-90 278 46 6 318 2 HEMB1 Delta-aminolevulinic acid dehydratase 1, chloroplastic Arabidopsis thaliana
Q42836 1.34e-89 277 47 6 314 2 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic Hordeum vulgare
P30124 1.92e-89 276 47 6 310 1 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic (Fragment) Pisum sativum
P45623 1.82e-88 274 47 6 317 3 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic Selaginella martensii
P54919 2.14e-88 271 48 3 318 3 hemB Delta-aminolevulinic acid dehydratase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P24493 4.15e-88 273 46 5 317 1 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic Spinacia oleracea
Q59334 4.2e-88 270 45 1 297 1 hemB Delta-aminolevulinic acid dehydratase Chlorobaculum parvum (strain DSM 263 / NCIMB 8327)
Q8KCJ0 6.92e-88 269 45 1 297 3 hemB Delta-aminolevulinic acid dehydratase Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
O84638 1.63e-86 266 45 2 311 3 hemB Delta-aminolevulinic acid dehydratase Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9Z7G1 3.11e-86 265 46 2 317 3 hemB Delta-aminolevulinic acid dehydratase Chlamydia pneumoniae
P43210 4.76e-86 267 48 6 318 2 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic Glycine max
Q43058 6.33e-86 268 48 6 318 2 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic Physcomitrium patens
P46723 2.91e-84 260 45 3 317 3 hemB Delta-aminolevulinic acid dehydratase Mycobacterium leprae (strain TN)
P9WMP5 6.87e-84 259 47 3 317 1 hemB Delta-aminolevulinic acid dehydratase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMP4 6.87e-84 259 47 3 317 3 hemB Delta-aminolevulinic acid dehydratase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P45622 4.48e-83 258 46 2 318 1 hemB Delta-aminolevulinic acid dehydratase Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q94LA4 9.06e-82 256 45 7 328 3 HEMB2 Probable delta-aminolevulinic acid dehydratase 2, chloroplastic Arabidopsis thaliana
Q9PLU4 1.27e-81 253 44 2 311 3 hemB Delta-aminolevulinic acid dehydratase Chlamydia muridarum (strain MoPn / Nigg)
Q42682 1.83e-79 250 44 6 317 2 HEMB Delta-aminolevulinic acid dehydratase, chloroplastic Chlamydomonas reinhardtii
Q59643 1.02e-77 243 45 5 321 1 hemB Delta-aminolevulinic acid dehydratase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P42504 2.6e-76 240 45 4 320 1 hemB Delta-aminolevulinic acid dehydratase Rhodobacter capsulatus
P10518 4.44e-76 239 44 5 300 1 Alad Delta-aminolevulinic acid dehydratase Mus musculus
Q58DK5 7.58e-75 236 44 5 302 2 ALAD Delta-aminolevulinic acid dehydratase Bos taurus
P13716 8.34e-74 233 43 5 302 1 ALAD Delta-aminolevulinic acid dehydratase Homo sapiens
P06214 2.11e-73 232 42 6 316 1 Alad Delta-aminolevulinic acid dehydratase Rattus norvegicus
Q60HH9 1.01e-71 228 42 5 302 2 ALAD Delta-aminolevulinic acid dehydratase Macaca fascicularis
P05373 1.46e-71 228 42 5 307 1 HEM2 Delta-aminolevulinic acid dehydratase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5R971 2.54e-71 227 42 5 302 2 ALAD Delta-aminolevulinic acid dehydratase Pongo abelii
O42768 7.54e-70 223 40 5 306 1 HEM2 Delta-aminolevulinic acid dehydratase Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138)
Q750E0 1.06e-68 221 41 5 305 3 HEM2 Delta-aminolevulinic acid dehydratase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
Q55E06 2.51e-66 214 40 5 295 3 alad Delta-aminolevulinic acid dehydratase Dictyostelium discoideum
P78974 2.65e-62 204 40 5 312 2 hem2 Delta-aminolevulinic acid dehydratase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q59295 5.1e-55 181 44 0 204 3 hemB Delta-aminolevulinic acid dehydratase (Fragment) Ruminiclostridium josui

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_02190
Feature type CDS
Gene hemB
Product porphobilinogen synthase
Location 420789 - 421763 (strand: -1)
Length 975 (nucleotides) / 324 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_589
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00490 Delta-aminolevulinic acid dehydratase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0113 Coenzyme transport and metabolism (H) H Delta-aminolevulinic acid dehydratase, porphobilinogen synthase

Kegg Ortholog Annotation(s)

Protein Sequence

MQHDIQRLRRIRQTPQMRDLFRETSLSLNDLALPIFVEEGADDYKAIDSMPGVMRIPEKRLAYEIERIAKAGIKSVMTFGVSHHLDATGSDAWAEDGLVARMSRICKETVPEMVVMSDTCFCEYTSHGHCGVVHDGVVDNDETLHNLGLQAVVAAQAGADFIAPSAAQDGQVRAIRLALDAAGFHQTGIVSYSTKFASALYGPFRDAAGSCLKGDRKTYQMDPMNRREAIRESLIDEQEGADMLMVKPAGAYLDILRDVRERSNLPLAAYQVSGEYAMIKLAAQAGAIDETRVALETLGAIKRAGADLIFSYFALSLAENKILS

Flanking regions ( +/- flanking 50bp)

GGTTTATACTGACCGCATTATTTTTTATGAAATAAGGAGCAACTGTCGTTATGCAACATGACATCCAGCGTCTCAGAAGAATTCGTCAGACCCCGCAGATGCGTGATCTGTTCCGGGAAACCTCATTAAGCCTCAATGATCTCGCGTTACCGATTTTTGTCGAAGAAGGCGCTGATGACTATAAAGCCATCGACAGCATGCCCGGCGTTATGCGCATTCCGGAAAAGCGCCTCGCTTACGAAATCGAGCGGATCGCCAAAGCCGGTATCAAATCCGTCATGACTTTCGGTGTTTCACATCATCTGGATGCAACCGGCAGTGATGCCTGGGCGGAAGATGGTCTGGTTGCGCGGATGTCCCGTATCTGCAAAGAGACCGTGCCTGAGATGGTGGTGATGTCCGATACCTGTTTCTGTGAATACACCAGCCACGGGCACTGCGGTGTGGTGCATGACGGCGTGGTCGATAACGACGAAACCCTGCATAACCTCGGGTTACAGGCAGTGGTTGCCGCACAGGCAGGGGCTGATTTTATCGCGCCTTCCGCAGCCCAGGACGGCCAGGTACGGGCTATCCGTCTGGCACTGGATGCCGCCGGGTTCCATCAGACCGGGATTGTGTCCTACTCCACCAAATTCGCCTCTGCCCTTTACGGCCCGTTCCGTGATGCAGCCGGTTCCTGCCTGAAAGGCGACCGCAAAACCTATCAGATGGATCCGATGAACCGCCGAGAGGCTATCCGTGAATCCCTGATTGATGAGCAGGAAGGTGCGGATATGCTGATGGTGAAACCGGCCGGAGCTTATCTGGATATTCTGCGCGATGTGCGCGAGCGTTCAAATCTGCCGCTGGCGGCCTATCAGGTGAGCGGTGAATACGCGATGATCAAACTGGCTGCACAGGCCGGTGCTATTGATGAAACCCGCGTTGCACTGGAGACTCTCGGCGCCATCAAACGTGCCGGGGCAGATTTAATTTTCAGTTATTTCGCCCTGAGCCTGGCAGAGAATAAGATCCTGAGCTGATACGCTGAATTATCTTCTTTGCTGAAAAATCCCGGTTCGCCGGGATTTTT