COG0113


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0113, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Delta-aminolevulinic acid dehydratase, porphobilinogen synthase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0113 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_589 FBDBKF_01720 32969 33943 -1 hemB porphobilinogen synthase Morganella morganii S1
1 group_589 EHELCC_02190 420789 421763 -1 hemB porphobilinogen synthase Morganella morganii S2
2 group_589 NLDBIP_01270 258373 259347 1 hemB porphobilinogen synthase Morganella morganii S4
3 group_589 LHKJJB_00765 133338 134312 -1 hemB porphobilinogen synthase Morganella morganii S3
4 group_589 HKOGLL_00805 138849 139823 -1 hemB porphobilinogen synthase Morganella morganii S5
5 group_589 F4V73_RS04050 856742 857716 -1 hemB porphobilinogen synthase Morganella psychrotolerans
6 group_589 PMI_RS07040 1535091 1536068 1 hemB porphobilinogen synthase Proteus mirabilis HI4320