PF14526


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF14526, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF14526
Description Integron-associated effector binding protein

Occurence in the database

PF14526 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2329 FBDBKF_18175 654 1568 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
1 group_419 FBDBKF_18920 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S1
2 group_2329 EHELCC_18210 527 1441 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
3 group_419 EHELCC_18665 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S2
4 group_2329 NLDBIP_18135 728 1642 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
5 group_419 NLDBIP_18640 24325 25263 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S4
6 group_2329 LHKJJB_18330 566 1480 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
7 group_419 LHKJJB_18535 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S3
8 group_2329 HKOGLL_18065 544 1458 -1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
9 group_419 HKOGLL_18270 250 1188 1 araC AraC-type DNA-binding domain and AraC-containing proteins Morganella morganii S5
10 group_2329 F4V73_RS01695 372336 373250 -1 helix-turn-helix domain-containing protein Morganella psychrotolerans
11 group_419 F4V73_RS13825 399088 400026 1 helix-turn-helix domain-containing protein Morganella psychrotolerans
12 group_2329 PMI_RS03950 890400 891296 -1 AraC family transcriptional regulator Proteus mirabilis HI4320
13 group_1144 PMI_RS18495 4060644 4061546 -1 robA MDR efflux pump AcrAB transcriptional activator RobA Proteus mirabilis HI4320