PF13649


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF13649, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 31 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF13649
Description Methyltransferase domain

Occurence in the database

PF13649 is associated with 31 different proteins (see tab "Protein list" and "Profile")
The 31 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_574 FBDBKF_01605 14948 15763 1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Morganella morganii S1
1 group_629 FBDBKF_02030 95179 95943 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S1
2 group_2524 FBDBKF_02280 143953 144723 -1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S1
3 group_1451 FBDBKF_09225 75067 75906 1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S1
4 group_3504 FBDBKF_17345 44630 46267 1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S1
5 group_3504 EHELCC_01545 309234 310871 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S2
6 group_574 EHELCC_02075 402768 403583 1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Morganella morganii S2
7 group_629 EHELCC_02500 482999 483763 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S2
8 group_2524 EHELCC_02750 531773 532543 -1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S2
9 group_1451 EHELCC_10185 70198 71037 -1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S2
10 group_2524 NLDBIP_00710 147593 148363 1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S4
11 group_629 NLDBIP_00960 196373 197137 1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S4
12 group_574 NLDBIP_01385 276553 277368 -1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Morganella morganii S4
13 group_3504 NLDBIP_01915 369265 370902 1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S4
14 group_1451 NLDBIP_10530 48469 49308 -1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S4
15 group_3504 LHKJJB_00120 21783 23420 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S3
16 group_574 LHKJJB_00650 115317 116132 1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Morganella morganii S3
17 group_629 LHKJJB_01075 195548 196312 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S3
18 group_2524 LHKJJB_01325 244322 245092 -1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S3
19 group_1451 LHKJJB_10825 142220 143059 1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S3
20 group_3504 HKOGLL_00160 27294 28931 -1 gcd14 tRNA A58 N-methylase Trm61 Morganella morganii S5
21 group_574 HKOGLL_00690 120828 121643 1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Morganella morganii S5
22 group_629 HKOGLL_01115 201059 201823 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella morganii S5
23 group_2524 HKOGLL_01365 249833 250603 -1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S5
24 group_1451 HKOGLL_13885 75521 76360 1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG Morganella morganii S5
25 group_574 F4V73_RS03945 837998 838813 1 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase Morganella psychrotolerans
26 group_629 F4V73_RS04395 930810 931565 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Morganella psychrotolerans
27 group_2524 F4V73_RS04655 981947 982717 -1 class I SAM-dependent methyltransferase Morganella psychrotolerans
28 group_216 PMI_RS03975 895392 896147 1 class I SAM-dependent methyltransferase Proteus mirabilis HI4320
29 group_629 PMI_RS05380 1178163 1178912 -1 cmoA carboxy-S-adenosyl-L-methionine synthase CmoA Proteus mirabilis HI4320
30 group_1451 PMI_RS13195 2929165 2929989 1 class I SAM-dependent methyltransferase Proteus mirabilis HI4320