PF03895


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03895, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03895
Description YadA-like membrane anchor domain

Occurence in the database

PF03895 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_81 FBDBKF_01590 12494 12724 -1 Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein Morganella morganii S1
1 group_178 FBDBKF_03960 189041 191266 -1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S1
2 group_81 FBDBKF_06415 118169 119443 -1 smc Chromosome segregation ATPase Smc Morganella morganii S1
3 group_81 EHELCC_02060 400314 400544 -1 Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein Morganella morganii S2
4 group_178 EHELCC_06575 55837 58062 1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S2
5 group_81 EHELCC_09460 118741 120015 -1 smc Chromosome segregation ATPase Smc Morganella morganii S2
6 group_81 NLDBIP_01400 279592 279822 1 Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein Morganella morganii S4
7 group_178 NLDBIP_06900 55710 57935 1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S4
8 group_81 NLDBIP_09840 118741 120015 -1 smc Chromosome segregation ATPase Smc Morganella morganii S4
9 group_81 LHKJJB_00635 112863 113093 -1 Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein Morganella morganii S3
10 group_178 LHKJJB_06435 19456 21681 1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S3
11 group_81 LHKJJB_07915 97223 98497 1 smc Chromosome segregation ATPase Smc Morganella morganii S3
12 group_81 HKOGLL_00675 118374 118604 -1 Trimeric autotransporter adhesin YadA-like C-terminal membrane anchor domain-containing protein Morganella morganii S5
13 group_178 HKOGLL_04495 211706 213931 -1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S5
14 group_81 HKOGLL_07465 97223 98497 1 smc Chromosome segregation ATPase Smc Morganella morganii S5
15 group_178 F4V73_RS10220 153914 154744 -1 YadA-like family protein Morganella psychrotolerans
16 group_178 F4V73_RS14140 41434 42516 -1 YadA-like family protein Morganella psychrotolerans
17 group_81 F4V73_RS19530 94358 95629 1 YadA C-terminal domain-containing protein Morganella psychrotolerans
18 group_81 PMI_RS10715 2356612 2358264 1 YadA-like family protein Proteus mirabilis HI4320
19 group_178 PMI_RS12715 2811965 2814190 -1 taaP trimeric autotransporter adhesin TaaP Proteus mirabilis HI4320